Click here to switch to the map view.

The map label for this gene is ywnB [H]

Identifier: 116516085

GI number: 116516085

Start: 1457530

End: 1458159

Strand: Reverse

Name: ywnB [H]

Synonym: SPD_1440

Alternate gene names: 116516085

Gene position: 1458159-1457530 (Counterclockwise)

Preceding gene: 116516868

Following gene: 116517150

Centisome position: 71.26

GC content: 35.71

Gene sequence:

>630_bases
ATGAAACTAGCAGTTATTGCAGCAAATGGACAAGTGGGGAAAGCAATTGTTGAAGAAGCAGTCAAACGAGGACATGAAGT
AACGGCTATTGTTCGTTCTGAAAACAAAAGTCAAGCTGAGTCTATTATTAAAAAAGATTTATTTGAGTTGACAAAAGATG
ATCTTACTGGATTTGATGCTGTTATTTCAGCGTTTGGTGCTTATACACCAGATACGCTACCGCTCCATAGCAAATCAATT
GAACTATTTAATCAGCTTCTTGCTGGAACACAGACACGTTTTCTAGTTGTAGGGGGAGCAGGAAGTCTTTATATAGATGA
AACAAAAACGACACGACTTTTAGATACGCCTGATTTTCCTGAAGAATTTAAGTCACTAGCAAAAGCTCAAGCGGATGAAT
TGGATCTTCTTCGTACAAAAAATAATCTCAACTGGACTTTTGTCAGTCCTGCTGTAGATTTTATTCCCGATGGTGAAAAA
ACAGGAAACTACATTCTAGCAGGAGAAATTTTTACTACTAATGAAAAAGGAATAAGCCAGATTAGTTATGCAGATTATGC
TATTGGATTGGTAGATGAACTTGAAAAAGGTCATCATATAAAAGAACGTATCTCTTTACTTGAAAAATAA

Upstream 100 bases:

>100_bases
GAAATATTTTGATAATAATTAAGCAAGACTATTGACATTGATTATTAAGAGTGTCACAATTGCTGTAACTAAAATAATTA
CAACAAGAGAGGTATAAAAA

Downstream 100 bases:

>100_bases
TAACTATGAGAGTATTAATGTTTGACAGAAAATTTAAATCTTGGTAAAATAGGGATTGTCGTAAAGACAAATAACTTCTT
CTTGGTTACAGGCATGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKLAVIAANGQVGKAIVEEAVKRGHEVTAIVRSENKSQAESIIKKDLFELTKDDLTGFDAVISAFGAYTPDTLPLHSKSI
ELFNQLLAGTQTRFLVVGGAGSLYIDETKTTRLLDTPDFPEEFKSLAKAQADELDLLRTKNNLNWTFVSPAVDFIPDGEK
TGNYILAGEIFTTNEKGISQISYADYAIGLVDELEKGHHIKERISLLEK

Sequences:

>Translated_209_residues
MKLAVIAANGQVGKAIVEEAVKRGHEVTAIVRSENKSQAESIIKKDLFELTKDDLTGFDAVISAFGAYTPDTLPLHSKSI
ELFNQLLAGTQTRFLVVGGAGSLYIDETKTTRLLDTPDFPEEFKSLAKAQADELDLLRTKNNLNWTFVSPAVDFIPDGEK
TGNYILAGEIFTTNEKGISQISYADYAIGLVDELEKGHHIKERISLLEK
>Mature_209_residues
MKLAVIAANGQVGKAIVEEAVKRGHEVTAIVRSENKSQAESIIKKDLFELTKDDLTGFDAVISAFGAYTPDTLPLHSKSI
ELFNQLLAGTQTRFLVVGGAGSLYIDETKTTRLLDTPDFPEEFKSLAKAQADELDLLRTKNNLNWTFVSPAVDFIPDGEK
TGNYILAGEIFTTNEKGISQISYADYAIGLVDELEKGHHIKERISLLEK

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 22959; Mature: 22959

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAVIAANGQVGKAIVEEAVKRGHEVTAIVRSENKSQAESIIKKDLFELTKDDLTGFDA
CEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHH
VISAFGAYTPDTLPLHSKSIELFNQLLAGTQTRFLVVGGAGSLYIDETKTTRLLDTPDFP
HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCEEECCCCCCH
EEFKSLAKAQADELDLLRTKNNLNWTFVSPAVDFIPDGEKTGNYILAGEIFTTNEKGISQ
HHHHHHHHHCCHHHHHHHCCCCCCEEEECCCHHCCCCCCCCCCEEEEEEEEECCCCCCHH
ISYADYAIGLVDELEKGHHIKERISLLEK
HHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MKLAVIAANGQVGKAIVEEAVKRGHEVTAIVRSENKSQAESIIKKDLFELTKDDLTGFDA
CEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHH
VISAFGAYTPDTLPLHSKSIELFNQLLAGTQTRFLVVGGAGSLYIDETKTTRLLDTPDFP
HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCEEECCCCCCH
EEFKSLAKAQADELDLLRTKNNLNWTFVSPAVDFIPDGEKTGNYILAGEIFTTNEKGISQ
HHHHHHHHHCCHHHHHHHCCCCCCEEEECCCHHCCCCCCCCCCEEEEEEEEECCCCCCHH
ISYADYAIGLVDELEKGHHIKERISLLEK
HHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]