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The map label for this gene is ycbL [C]

Identifier: 116515803

GI number: 116515803

Start: 1473683

End: 1474312

Strand: Direct

Name: ycbL [C]

Synonym: SPD_1459

Alternate gene names: 116515803

Gene position: 1473683-1474312 (Clockwise)

Preceding gene: 116516460

Following gene: 116515895

Centisome position: 72.02

GC content: 47.62

Gene sequence:

>630_bases
ATGAAAATCCATAAAACCGTGAATCCTGTTGCCTATGAAAATACCTATTATCTAGAAGGCGAAAAGCACCTCATCGTCGT
CGATCCTGGTAGTCATTGGGAAGCCATTCGTCAGACAATCGAGAAGATCAACAAACCGATCTGTGCTATTCTCTTGACCC
ACGCCCATTATGACCATATCATGAGTCTGGACTTGGTTTGCGAGACGTTTGGCAATCCTCCTGTCTATATCGCAGAGAGC
GAAGCCAGCTGGCTCTACACTCCTGTCGATAATCTCTCCGGTCTCCCTCGCCACGATGATATGGCAGATGTGGTCACAAA
ACCTGCAGAACACACCTTTGTCTTTCACGAAGAATACCAACTAGAGGAATTTCATTTTAAGGTTCTGCCGACCCCAGGGC
ACTCTATCGGTGGTGTTTCCCTAGTCTTTCCTGATGCTCACCTAGTCTTGACGGGAGATGCTCTATTCCGCGAAACTATC
GGACGGACCGACCTTCCGACTGGTAGCATGGAGCAACTCCTTCATAGTATCCAGACCCAACTCTTCACCCTACCAAACTA
CGATGTCTATCCAGGACATGGTTCAGCTACTACTATCGCTCACGAAAAGGCCTTCAATCCCTTTTTTTAG

Upstream 100 bases:

>100_bases
CAGGCTGTTCAAAGCACTGCTTTGAGGTTGCAGATAAAATTGACGCAGTTTGAAGAGATTTTCGAAGAGTATTAGTACAT
TCTTTGAGATTGGAGCTAGT

Downstream 100 bases:

>100_bases
CAAGATGATGACAATCGAAATTTAAGTAAACTATCCAGCAAATCTTTCTATTATAAAAGGCATCCTATCAAGGTTTTCAC
ACGTGATTGGATGCCTTTTT

Product: metallo-beta-lactamase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHIMSLDLVCETFGNPPVYIAES
EASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQLEEFHFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETI
GRTDLPTGSMEQLLHSIQTQLFTLPNYDVYPGHGSATTIAHEKAFNPFF

Sequences:

>Translated_209_residues
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHIMSLDLVCETFGNPPVYIAES
EASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQLEEFHFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETI
GRTDLPTGSMEQLLHSIQTQLFTLPNYDVYPGHGSATTIAHEKAFNPFF
>Mature_209_residues
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHIMSLDLVCETFGNPPVYIAES
EASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQLEEFHFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETI
GRTDLPTGSMEQLLHSIQTQLFTLPNYDVYPGHGSATTIAHEKAFNPFF

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787158, Length=197, Percent_Identity=29.4416243654822, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23564; Mature: 23564

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHI
CCCCCCCCCEEECCEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
MSLDLVCETFGNPPVYIAESEASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQ
HHHHHHHHHCCCCCEEEEECCCCEEEECHHHCCCCCCCCCHHHHHCCCCCCEEEEECCCE
LEEFHFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETIGRTDLPTGSMEQLLHSIQTQ
EEEEEEEEECCCCCCCCCEEEEECCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LFTLPNYDVYPGHGSATTIAHEKAFNPFF
EEECCCCCEECCCCCEEEEEHHCCCCCCC
>Mature Secondary Structure
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHI
CCCCCCCCCEEECCEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
MSLDLVCETFGNPPVYIAESEASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQ
HHHHHHHHHCCCCCEEEEECCCCEEEECHHHCCCCCCCCCHHHHHCCCCCCEEEEECCCE
LEEFHFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETIGRTDLPTGSMEQLLHSIQTQ
EEEEEEEEECCCCCCCCCEEEEECCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LFTLPNYDVYPGHGSATTIAHEKAFNPFF
EEECCCCCEECCCCCEEEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA