| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is pgm [H]
Identifier: 116515604
GI number: 116515604
Start: 1341179
End: 1342897
Strand: Direct
Name: pgm [H]
Synonym: SPD_1326
Alternate gene names: 116515604
Gene position: 1341179-1342897 (Clockwise)
Preceding gene: 116516831
Following gene: 116516657
Centisome position: 65.55
GC content: 43.28
Gene sequence:
>1719_bases ATGTCTTACCAAGAAAATTACCAGAAATGGGTTGATTTTGTGGAGCTTCCTGACTACCTTCGTCAAGATTTGGAAAATAT GGACGAAAAAACTAAGGAAGATGCCTTCTATACAAATCTTGAATTTGGTACTGCAGGTATGCGTGGCTTGGTTGGTGCTG GTACAAACCGTATCAACATCTACGTTGTTCGCCAAGCTACTGAAGGATTGGCTCGTTTGATTGAGTCAAAAGGTGGAAAC GAGAAAGAACGCGGTGTAGCAATTGCCTACGATAGCCGTCACTTCTCACCTGAGTTTGCCTTTGAATCTGCGGCAGTTCT TGCTAAACACGGCATCAAATCTTACGTATTTGAAAGCCTTCGTCCGACTCCAGAACTATCATTTGCAGTTCGTCATCTCA ACTGTTTCGCAGGTATCATGGTCACAGCCAGCCACAACCCTGCTCCATTTAACGGTTACAAGGTTTACGGTGAAGACGGT GGACAAATGCCTCCACACGATGCGGACGCTTTGACTACTTATATCCGTGCAATCGAAAACCCATTTGCAGTTGAAGTTGC TGATGTGGAAACTGAAAAAGCTTCTGGCTTGATTGAAGTTATCGGCGAAGCTGTTGACATAGAATACCTTAAAGAGGTTA AGGACATAAACATCAACCCAGCCTTGATTGAAGAATTTGGTAAAGACATGAAGATTGTCTACACACCACTTCATGGTACT GGTGAAATGTTGGCTCGTCGTGCTCTTGCCCAAGCAGGATTTGACTCTGTTCAAGTTGTTGAAGCGCAAGCAACTGCTGA CCCAGACTTTTCAACTGTAACATCTCCAAACCCAGAAAGCCAAGCAGCCTTTGCCCTTGCTGAAGAACTTGGTCGTCAAG TTGGTGCAGATGTTCTTGTCGCAACTGACCCAGACGCTGACCGTGTTGGTGTTGAAGTTCTTCAAAAAGATGGTAGCTAC CTCAACCTTTCAGGTAACCAAATCGGTGCTATCATGGCTAAATACATCTTGGAAGCTCACAAAAACGCTGGAACTCTTCC TGAAAATGCCGCTCTCTGCAAATCTATCGTTTCAACTGACTTGGTAACGAAGATTGCTGAAAGCTACGGCGCAACTATGT TCAACGTCTTGACAGGTTTCAAATTTATCGCTGAAAAAATCCAAGAATTCGAAGAAAAACACAACCACACTTACATGATG GGATTTGAAGAAAGCTTCGGTTACTTGATTAAACCATTTGTACGTGATAAAGATGCCATCCAAGCCGTTCTTGTAGTTGC TGAACTTGCTGCCTACTACCGTTCTCGTGGTTTGACACTTGCTGACGGTATCGAAGAAATCTATAAAGAATATGGCTACT ACGCAGAAAAAACAATCTCTGTTACTCTTTCAGGTGTCGATGGTGCTGAACAAATCAAAGCGATTATGGCTAAATTCCGC AACAATGCTCCAACAGAATGGAACGCAACAGCTATCACTGTCGTAGAAGACTTCAAGGCACAAACTGCTACTGTTGCTGA CGGTACTGTTACAAACTTGACAACTCCTCCAAGTGATGTGTTGAAATACACACTTGCTGACGGTTCATGGATTGCCGTTC GCCCTTCAGGTACAGAACCAAAAATCAAGTTCTACATTGCAGTTGTAGGGGAAACCAACGAAGAATCACAAGCTAAGATT GCTAACATCGAAGCAGAAATCAATGCATTTGTAAAATAA
Upstream 100 bases:
>100_bases TGGTTTGAAGAGATGTTCGAAGCAGATAAGGTTTTACTAAAACTAAAAAAAATGATATAATTAAACTGATTAAATGTTTT AAAAATAAAGGAGAATTTGA
Downstream 100 bases:
>100_bases AGACCTATAAAAGATGAGACCAACCAACCTCATCTTTTTTCGTATCAAATCTAAGCAATTTTAGAAACTTTATGGCATAC TAGACTTATCAATGAAAGCG
Product: phosphoglucomutase/phosphomannomutase family protein
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MSYQENYQKWVDFVELPDYLRQDLENMDEKTKEDAFYTNLEFGTAGMRGLVGAGTNRINIYVVRQATEGLARLIESKGGN EKERGVAIAYDSRHFSPEFAFESAAVLAKHGIKSYVFESLRPTPELSFAVRHLNCFAGIMVTASHNPAPFNGYKVYGEDG GQMPPHDADALTTYIRAIENPFAVEVADVETEKASGLIEVIGEAVDIEYLKEVKDININPALIEEFGKDMKIVYTPLHGT GEMLARRALAQAGFDSVQVVEAQATADPDFSTVTSPNPESQAAFALAEELGRQVGADVLVATDPDADRVGVEVLQKDGSY LNLSGNQIGAIMAKYILEAHKNAGTLPENAALCKSIVSTDLVTKIAESYGATMFNVLTGFKFIAEKIQEFEEKHNHTYMM GFEESFGYLIKPFVRDKDAIQAVLVVAELAAYYRSRGLTLADGIEEIYKEYGYYAEKTISVTLSGVDGAEQIKAIMAKFR NNAPTEWNATAITVVEDFKAQTATVADGTVTNLTTPPSDVLKYTLADGSWIAVRPSGTEPKIKFYIAVVGETNEESQAKI ANIEAEINAFVK
Sequences:
>Translated_572_residues MSYQENYQKWVDFVELPDYLRQDLENMDEKTKEDAFYTNLEFGTAGMRGLVGAGTNRINIYVVRQATEGLARLIESKGGN EKERGVAIAYDSRHFSPEFAFESAAVLAKHGIKSYVFESLRPTPELSFAVRHLNCFAGIMVTASHNPAPFNGYKVYGEDG GQMPPHDADALTTYIRAIENPFAVEVADVETEKASGLIEVIGEAVDIEYLKEVKDININPALIEEFGKDMKIVYTPLHGT GEMLARRALAQAGFDSVQVVEAQATADPDFSTVTSPNPESQAAFALAEELGRQVGADVLVATDPDADRVGVEVLQKDGSY LNLSGNQIGAIMAKYILEAHKNAGTLPENAALCKSIVSTDLVTKIAESYGATMFNVLTGFKFIAEKIQEFEEKHNHTYMM GFEESFGYLIKPFVRDKDAIQAVLVVAELAAYYRSRGLTLADGIEEIYKEYGYYAEKTISVTLSGVDGAEQIKAIMAKFR NNAPTEWNATAITVVEDFKAQTATVADGTVTNLTTPPSDVLKYTLADGSWIAVRPSGTEPKIKFYIAVVGETNEESQAKI ANIEAEINAFVK >Mature_571_residues SYQENYQKWVDFVELPDYLRQDLENMDEKTKEDAFYTNLEFGTAGMRGLVGAGTNRINIYVVRQATEGLARLIESKGGNE KERGVAIAYDSRHFSPEFAFESAAVLAKHGIKSYVFESLRPTPELSFAVRHLNCFAGIMVTASHNPAPFNGYKVYGEDGG QMPPHDADALTTYIRAIENPFAVEVADVETEKASGLIEVIGEAVDIEYLKEVKDININPALIEEFGKDMKIVYTPLHGTG EMLARRALAQAGFDSVQVVEAQATADPDFSTVTSPNPESQAAFALAEELGRQVGADVLVATDPDADRVGVEVLQKDGSYL NLSGNQIGAIMAKYILEAHKNAGTLPENAALCKSIVSTDLVTKIAESYGATMFNVLTGFKFIAEKIQEFEEKHNHTYMMG FEESFGYLIKPFVRDKDAIQAVLVVAELAAYYRSRGLTLADGIEEIYKEYGYYAEKTISVTLSGVDGAEQIKAIMAKFRN NAPTEWNATAITVVEDFKAQTATVADGTVTNLTTPPSDVLKYTLADGSWIAVRPSGTEPKIKFYIAVVGETNEESQAKIA NIEAEINAFVK
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=548, Percent_Identity=31.021897810219, Blast_Score=266, Evalue=4e-71, Organism=Homo sapiens, GI31377548, Length=570, Percent_Identity=31.2280701754386, Blast_Score=251, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71993870, Length=564, Percent_Identity=31.9148936170213, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI71993878, Length=308, Percent_Identity=35.0649350649351, Blast_Score=154, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6323934, Length=565, Percent_Identity=32.0353982300885, Blast_Score=209, Evalue=1e-54, Organism=Drosophila melanogaster, GI20129809, Length=574, Percent_Identity=29.7909407665505, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24651977, Length=477, Percent_Identity=31.2368972746331, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI24653722, Length=558, Percent_Identity=29.2114695340502, Blast_Score=218, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 62671; Mature: 62540
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQENYQKWVDFVELPDYLRQDLENMDEKTKEDAFYTNLEFGTAGMRGLVGAGTNRINI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCCCEEEE YVVRQATEGLARLIESKGGNEKERGVAIAYDSRHFSPEFAFESAAVLAKHGIKSYVFESL EEEECHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHC RPTPELSFAVRHLNCFAGIMVTASHNPAPFNGYKVYGEDGGQMPPHDADALTTYIRAIEN CCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC PFAVEVADVETEKASGLIEVIGEAVDIEYLKEVKDININPALIEEFGKDMKIVYTPLHGT CCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCC GEMLARRALAQAGFDSVQVVEAQATADPDFSTVTSPNPESQAAFALAEELGRQVGADVLV HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE ATDPDADRVGVEVLQKDGSYLNLSGNQIGAIMAKYILEAHKNAGTLPENAALCKSIVSTD ECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LVTKIAESYGATMFNVLTGFKFIAEKIQEFEEKHNHTYMMGFEESFGYLIKPFVRDKDAI HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHCCHHHH QAVLVVAELAAYYRSRGLTLADGIEEIYKEYGYYAEKTISVTLSGVDGAEQIKAIMAKFR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHHHHHHHH NNAPTEWNATAITVVEDFKAQTATVADGTVTNLTTPPSDVLKYTLADGSWIAVRPSGTEP CCCCCCCCCEEEEEEECCCCCEEEECCCCEECCCCCHHHHHEEEECCCCEEEEECCCCCC KIKFYIAVVGETNEESQAKIANIEAEINAFVK EEEEEEEEEECCCCCCCHHHEEHHHHHHHHCC >Mature Secondary Structure SYQENYQKWVDFVELPDYLRQDLENMDEKTKEDAFYTNLEFGTAGMRGLVGAGTNRINI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCCCEEEE YVVRQATEGLARLIESKGGNEKERGVAIAYDSRHFSPEFAFESAAVLAKHGIKSYVFESL EEEECHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHC RPTPELSFAVRHLNCFAGIMVTASHNPAPFNGYKVYGEDGGQMPPHDADALTTYIRAIEN CCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC PFAVEVADVETEKASGLIEVIGEAVDIEYLKEVKDININPALIEEFGKDMKIVYTPLHGT CCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCC GEMLARRALAQAGFDSVQVVEAQATADPDFSTVTSPNPESQAAFALAEELGRQVGADVLV HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE ATDPDADRVGVEVLQKDGSYLNLSGNQIGAIMAKYILEAHKNAGTLPENAALCKSIVSTD ECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LVTKIAESYGATMFNVLTGFKFIAEKIQEFEEKHNHTYMMGFEESFGYLIKPFVRDKDAI HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHCCHHHH QAVLVVAELAAYYRSRGLTLADGIEEIYKEYGYYAEKTISVTLSGVDGAEQIKAIMAKFR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHHHHHHHH NNAPTEWNATAITVVEDFKAQTATVADGTVTNLTTPPSDVLKYTLADGSWIAVRPSGTEP CCCCCCCCCEEEEEEECCCCCEEEECCCCEECCCCCHHHHHEEEECCCCEEEEECCCCCC KIKFYIAVVGETNEESQAKIANIEAEINAFVK EEEEEEEEEECCCCCCCHHHEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]