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The map label for this gene is potH [H]

Identifier: 116515539

GI number: 116515539

Start: 1252155

End: 1252961

Strand: Reverse

Name: potH [H]

Synonym: SPD_1220

Alternate gene names: 116515539

Gene position: 1252961-1252155 (Counterclockwise)

Preceding gene: 116516399

Following gene: 116517092

Centisome position: 61.24

GC content: 42.13

Gene sequence:

>807_bases
ATGAAGAAAACAAGCTCTAAACTCTTTGTAGTGCCCTACATGCTTTGGATTGCCCTCTTTGTATTGGCACCCTTGGTCTT
GATTTTCGGACAATCCTTTTTCAACATTGAAGGCCAGTTTAGTTTAGAAAATTATAAATCTTACTTTGCGTCACAAAACT
TGACCTACCTCAAAATGAGTTTCAACTCAGTGCTTTATGCAGGGATTGTGACCTTTGTGACCTTGCTTATCAGCTATCCA
ACAGCCCTCTTTTTGACCCGTCTCAAGCACCGTCAACTCTGGCTCATGCTGATTATCCTTCCTACCTGGATCAATTTGCT
CCTTAAAGCCTATGCTTTTATCGGGATTTTTGGTCAAAATGGCTCTATTAACCAATTCTTGGAATTTATCGGAATTGGTT
CACAACAGTTGCTTTTTACCGATTTTTCCTTTATCTTTGTCGCAAGCTACATCGAGCTCCCCTTTATGATTTTGCCGATT
TTCAATGTCTTAGACGATATGGATAATAATCTCATCAATGCTAGTTACGACCTTGGTGCAACTAAGTGGGAGACCTTCCG
TCATGTCATCTTCCCTCTATCTATGAACGGTGTGCGAAGTGGGGTTCAGTCGGTCTTTATCCCAAGTTTGAGTCTCTTCA
TGCTGACCCGTTTGATTGGTGGGAACCGCGTTATCACCTTGGGGACGGCTATTGAGCAGAATTTTCTAACCAATGACAAC
TATGGTATGGGTTCAACTATCGGTGTGATTCTCATCCTGACCATGTTCATCACCATGTGGGTGACTAAGGAAAGGAGAGA
ACGATGA

Upstream 100 bases:

>100_bases
CTCAATGAAACCGAAGAAGAGTTCGATGCTCGTATCGAAGAATACGTGGAAATCGAAGAGCAAGAAGCAGGTCTGATCAA
TGCGATCGAGGAGGAAAGAG

Downstream 100 bases:

>100_bases
AAAAATTTGCCAACCTTTATCTGGGACTGGTCTTTCTGGTCCTCTACCTGCCTATCTTTTACTTGATTGGCTATGCCTTT
AATGCTGGTGATGATATGAA

Product: spermidine/putrescine ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKKTSSKLFVVPYMLWIALFVLAPLVLIFGQSFFNIEGQFSLENYKSYFASQNLTYLKMSFNSVLYAGIVTFVTLLISYP
TALFLTRLKHRQLWLMLIILPTWINLLLKAYAFIGIFGQNGSINQFLEFIGIGSQQLLFTDFSFIFVASYIELPFMILPI
FNVLDDMDNNLINASYDLGATKWETFRHVIFPLSMNGVRSGVQSVFIPSLSLFMLTRLIGGNRVITLGTAIEQNFLTNDN
YGMGSTIGVILILTMFITMWVTKERRER

Sequences:

>Translated_268_residues
MKKTSSKLFVVPYMLWIALFVLAPLVLIFGQSFFNIEGQFSLENYKSYFASQNLTYLKMSFNSVLYAGIVTFVTLLISYP
TALFLTRLKHRQLWLMLIILPTWINLLLKAYAFIGIFGQNGSINQFLEFIGIGSQQLLFTDFSFIFVASYIELPFMILPI
FNVLDDMDNNLINASYDLGATKWETFRHVIFPLSMNGVRSGVQSVFIPSLSLFMLTRLIGGNRVITLGTAIEQNFLTNDN
YGMGSTIGVILILTMFITMWVTKERRER
>Mature_268_residues
MKKTSSKLFVVPYMLWIALFVLAPLVLIFGQSFFNIEGQFSLENYKSYFASQNLTYLKMSFNSVLYAGIVTFVTLLISYP
TALFLTRLKHRQLWLMLIILPTWINLLLKAYAFIGIFGQNGSINQFLEFIGIGSQQLLFTDFSFIFVASYIELPFMILPI
FNVLDDMDNNLINASYDLGATKWETFRHVIFPLSMNGVRSGVQSVFIPSLSLFMLTRLIGGNRVITLGTAIEQNFLTNDN
YGMGSTIGVILILTMFITMWVTKERRER

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=238, Percent_Identity=34.0336134453782, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1787369, Length=250, Percent_Identity=32.4, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1787713, Length=231, Percent_Identity=26.8398268398268, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30660; Mature: 30660

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTSSKLFVVPYMLWIALFVLAPLVLIFGQSFFNIEGQFSLENYKSYFASQNLTYLKMS
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEHHHHHHHHHCCCCEEEEEH
FNSVLYAGIVTFVTLLISYPTALFLTRLKHRQLWLMLIILPTWINLLLKAYAFIGIFGQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
GSINQFLEFIGIGSQQLLFTDFSFIFVASYIELPFMILPIFNVLDDMDNNLINASYDLGA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
TKWETFRHVIFPLSMNGVRSGVQSVFIPSLSLFMLTRLIGGNRVITLGTAIEQNFLTNDN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCC
YGMGSTIGVILILTMFITMWVTKERRER
CCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTSSKLFVVPYMLWIALFVLAPLVLIFGQSFFNIEGQFSLENYKSYFASQNLTYLKMS
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEHHHHHHHHHCCCCEEEEEH
FNSVLYAGIVTFVTLLISYPTALFLTRLKHRQLWLMLIILPTWINLLLKAYAFIGIFGQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
GSINQFLEFIGIGSQQLLFTDFSFIFVASYIELPFMILPIFNVLDDMDNNLINASYDLGA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
TKWETFRHVIFPLSMNGVRSGVQSVFIPSLSLFMLTRLIGGNRVITLGTAIEQNFLTNDN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCC
YGMGSTIGVILILTMFITMWVTKERRER
CCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]