| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515351
Identifier: 116515351
GI number: 116515351
Start: 291204
End: 291845
Strand: Reverse
Name: 116515351
Synonym: SPD_0291
Alternate gene names: NA
Gene position: 291845-291204 (Counterclockwise)
Preceding gene: 116516839
Following gene: 116516452
Centisome position: 14.26
GC content: 41.12
Gene sequence:
>642_bases ATGAAAATCGCATTAATCAATGAAAATAGTCAAGCTAGCAAGAATCACATTATTTACGATAGTCTAAAAGAAGCGACAGA TAAAAAAGACTACCAATTATTTAACTATGGTATGCGTGGAGAAGAAGGAGAAAGTCAATTAACTTATGTGCAGAACGGAC TAATGGCTGCCATCCTTTTAAATACAAAGGCAGTTGACTTTGTTGTTACCGGCTGTGGTACGGGTGTAGGGGCTATGCTT GCTTTAAACAGCTTCCCTGGTGTTGTCTGTGGTCTAGCAGTGGACCCAACTGACGCTTACCTTTATTCTCAAATCAATGG TGGTAACGCCTTGTCTATCCCTTATGCCAAAGGATTTGGCTGGGGGGCAGAACTGACCCTCAAATTGATGTTTGAACGCT TATTTGCTGAAGAAATGGGCGGTGGCTACCCAAGAGAACGTGTAATCCCTGAACAACGCAACGCTCGTATCTTAAACGAG GTGAAACAAATCACCCACAATGATTTGATGACCATCCTTAAAACAATCGACCAAGACTTCCTCAAAGACACCATCTCTGG CAAATATTTCCAAGAATACTTCTTTGAAAACTGCCAAGATGATGAAGTCGCTGCTTATTTGAAAGAAGTATTAGCCAAGT AA
Upstream 100 bases:
>100_bases TGATGCCAGCAATTTTGTCAATGGCCACATCCTATATGTAGATGGCGGTATCTTAGCCTACATCGGAAAACAACCTGAGT AAAAATAGAAAGAAGATCTT
Downstream 100 bases:
>100_bases AGCTATTCTAAACCAGAAAGGAACTAATGGATGACGAAAATATTACTGTTTGGCGAACCATTAATTCGAATCTCACCATT AGATGCCACCAGTATCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Ribose 5-Phosphate Isomerase; Sugar-Phosphate Isomerase; Sugar-Phosphate Isomerase LacAB/RpiB Family; Galactose-6-Phosphate Isomerase; Ypothetical Protein SMU.; Ribose 5-Phosphate Isomerase RpiB; Galactose-6-Phosphate Isomerase LacB Subunit; LOW QUALITY PROTEIN Sugar-Phosphate Isomerase
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKIALINENSQASKNHIIYDSLKEATDKKDYQLFNYGMRGEEGESQLTYVQNGLMAAILLNTKAVDFVVTGCGTGVGAML ALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFGWGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNE VKQITHNDLMTILKTIDQDFLKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK
Sequences:
>Translated_213_residues MKIALINENSQASKNHIIYDSLKEATDKKDYQLFNYGMRGEEGESQLTYVQNGLMAAILLNTKAVDFVVTGCGTGVGAML ALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFGWGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNE VKQITHNDLMTILKTIDQDFLKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK >Mature_213_residues MKIALINENSQASKNHIIYDSLKEATDKKDYQLFNYGMRGEEGESQLTYVQNGLMAAILLNTKAVDFVVTGCGTGVGAML ALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFGWGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNE VKQITHNDLMTILKTIDQDFLKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK
Specific function: Unknown
COG id: COG0698
COG function: function code G; Ribose 5-phosphate isomerase RpiB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23724; Mature: 23724
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALINENSQASKNHIIYDSLKEATDKKDYQLFNYGMRGEEGESQLTYVQNGLMAAILL CEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHEEHHH NTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFG CCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCCC WGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNEVKQITHNDLMTILKTIDQDF CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK HHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKIALINENSQASKNHIIYDSLKEATDKKDYQLFNYGMRGEEGESQLTYVQNGLMAAILL CEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHEEHHH NTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFG CCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCCC WGAELTLKLMFERLFAEEMGGGYPRERVIPEQRNARILNEVKQITHNDLMTILKTIDQDF CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKDTISGKYFQEYFFENCQDDEVAAYLKEVLAK HHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA