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The map label for this gene is fliH [H]

Identifier: 116514988

GI number: 116514988

Start: 51357

End: 52046

Strand: Direct

Name: fliH [H]

Synonym: BCc_045

Alternate gene names: 116514988

Gene position: 51357-52046 (Clockwise)

Preceding gene: 116514987

Following gene: 116514989

Centisome position: 12.33

GC content: 15.22

Gene sequence:

>690_bases
ATGAAAAATACTATAGAAAAAAATTCTTGGAAGAAATGGAAACCTAAAAAAGATAAAATAAGATTCAATTTTATTAATAA
AAAAAAAAATAATATATCTAAAAATATTTTTTTTAAAGAAAATAATTTATATAATAAAAAAAATAATTCTAAAGATTTAT
TAGACATGTACATAAAAGGATATGAAAAAGGAATTATAGACGGATATCAAAAAGGTTATCAAATTGGCTGGATTCAAGGT
TATTCTTCATTTGAAAATTTTTTTTTAAAAAATTTTAAATCTTGTATATATTTTCAATATATAGATTTTTTAAATCAATT
TAAATATGCTATTAAAATTTTTAATAATAATTTTTCTAAACGTTTAACAAAAATTATATTTTGTATATCAAAAATTTTAA
TTGATGATATTTATTTAAAAAAAAAAAAATTTATAATAACAAGAATAAAAAAATTGACTCTTAATCCTAAATATATATTA
AAAAAATTACAATTACATATTCATCCTAATAATTATAATTTTATTAAAAAAGAATTTGGTAAATTATTTTATAAATATAA
TTGGACAATTGTATTAAATGATACATTAGATATTAATAGTTATCGTATTTTTACAGATGATGGAGAAATAGATGCAACAA
TTAAATCTTTTTGGAATCAAATTAAAAATGCAACTAATTTATTGGATTAA

Upstream 100 bases:

>100_bases
CATTTGAAAAAATGTATTTTAAAAAAAATTTATTATTAGAAAATATAAAAAGATATATACGTAATGGAAAAATATTAATA
ATATAAAATAGGTATTTCAT

Downstream 100 bases:

>100_bases
TATATATGAATTTTTTATTAAATTCCTGGTTTTATAATACTAATATTTTTGAAAAAAATTTATTAAATATTTCAAACAGT
ATATATATTGGTAAAGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKNTIEKNSWKKWKPKKDKIRFNFINKKKNNISKNIFFKENNLYNKKNNSKDLLDMYIKGYEKGIIDGYQKGYQIGWIQG
YSSFENFFLKNFKSCIYFQYIDFLNQFKYAIKIFNNNFSKRLTKIIFCISKILIDDIYLKKKKFIITRIKKLTLNPKYIL
KKLQLHIHPNNYNFIKKEFGKLFYKYNWTIVLNDTLDINSYRIFTDDGEIDATIKSFWNQIKNATNLLD

Sequences:

>Translated_229_residues
MKNTIEKNSWKKWKPKKDKIRFNFINKKKNNISKNIFFKENNLYNKKNNSKDLLDMYIKGYEKGIIDGYQKGYQIGWIQG
YSSFENFFLKNFKSCIYFQYIDFLNQFKYAIKIFNNNFSKRLTKIIFCISKILIDDIYLKKKKFIITRIKKLTLNPKYIL
KKLQLHIHPNNYNFIKKEFGKLFYKYNWTIVLNDTLDINSYRIFTDDGEIDATIKSFWNQIKNATNLLD
>Mature_229_residues
MKNTIEKNSWKKWKPKKDKIRFNFINKKKNNISKNIFFKENNLYNKKNNSKDLLDMYIKGYEKGIIDGYQKGYQIGWIQG
YSSFENFFLKNFKSCIYFQYIDFLNQFKYAIKIFNNNFSKRLTKIIFCISKILIDDIYLKKKKFIITRIKKLTLNPKYIL
KKLQLHIHPNNYNFIKKEFGKLFYKYNWTIVLNDTLDINSYRIFTDDGEIDATIKSFWNQIKNATNLLD

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 27825; Mature: 27825

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTIEKNSWKKWKPKKDKIRFNFINKKKNNISKNIFFKENNLYNKKNNSKDLLDMYIKG
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
YEKGIIDGYQKGYQIGWIQGYSSFENFFLKNFKSCIYFQYIDFLNQFKYAIKIFNNNFSK
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RLTKIIFCISKILIDDIYLKKKKFIITRIKKLTLNPKYILKKLQLHIHPNNYNFIKKEFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHHH
KLFYKYNWTIVLNDTLDINSYRIFTDDGEIDATIKSFWNQIKNATNLLD
HEEEEEEEEEEEECEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNTIEKNSWKKWKPKKDKIRFNFINKKKNNISKNIFFKENNLYNKKNNSKDLLDMYIKG
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
YEKGIIDGYQKGYQIGWIQGYSSFENFFLKNFKSCIYFQYIDFLNQFKYAIKIFNNNFSK
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RLTKIIFCISKILIDDIYLKKKKFIITRIKKLTLNPKYILKKLQLHIHPNNYNFIKKEFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHHH
KLFYKYNWTIVLNDTLDINSYRIFTDDGEIDATIKSFWNQIKNATNLLD
HEEEEEEEEEEEECEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]