Click here to switch to the map view.

The map label for this gene is 116496309

Identifier: 116496309

GI number: 116496309

Start: 2874712

End: 2875776

Strand: Direct

Name: 116496309

Synonym: LSEI_2893

Alternate gene names: NA

Gene position: 2874712-2875776 (Clockwise)

Preceding gene: 116496308

Following gene: 116496310

Centisome position: 99.29

GC content: 46.95

Gene sequence:

>1065_bases
ATGAATAAAGGACGATCAAAGGGTAAACGTATTTCGCAACGCATGGTGATCATTGGGATTGGTGCATTAGCCATGATTGG
CGTCACCGTTTTTTTCCTAGTCACATCCAAAAAACCGACATCATCACCCGCACCGACAACGATAGCCACCTTCCAAGTGA
AGAAGCATGAGTTACGAGTGCCGGGACAGGTACAGGCCGTACGTACGCAAAAAATCGACATTCCTGAAGGCACCGTCCAA
AACATGACGGTTAAAAATGGCGATAGTGTGACGGCTGATCAACAGCTTTTGACAGTTTACAAGCCTGACGTACAAACCAA
GGTTGATGAAGCTTCGCGGGCACTTGAAAAACAGCAACGCAGTCAAGCCACACTTGATCAGCAAATCAGCCAAATCAAAG
CTACTTTAAGTAAGACCGCCGCCGATGATCCACAGAAGTCCGCCTTGCAGACACAACTTGATGAGGCGCAGAATAATCGC
CAAGATTCGGCTGATGCCATCACCCAATCGAATCAGGATATCGCTAAATTAAAGCAAAGTCTGAATACGGTGGCTAAGGC
TCCCTTTGCAGGTCGGCTGTACATTGACTATCAAGCAAATGGCAGTCAGACCATCACGGAAACCTCGGCTGAAGTTGAAG
CCGTTGGTGAGGTCTCCGAATTTGATTATTCAAGTGTTAAAATCGGTCAATCTGCAACCGTACAGGCGCTGGCAAGCAAA
ACAAAGCAAGCGACAGACATCAATTTTATTAGCAGTGATCCGGCTAAATCCAGCAAGCCGAATCTCGCCAAGTATGAACT
CACGACGAAATTACGTGACGGCTTTTTAAACGGCCAATCCATCACCATCACGATTCCCCTAAGCGGTTTGTTAATTCCCA
AAGAAGCGGTTAAGGACGGGGCCGTTTTCAAAATCGTCAATAAACGCGCCATCCGAACTAAAGTAACCTATGTGGCAAAA
GACGATATGTATGAAGTCTCAGATGGCCTCAGCAGCGGCGACCGCATTCTTCAAAAACCCGACAAAACAATCAAAGACGG
GGCGAAGGTGAACGTTGATGATTGA

Upstream 100 bases:

>100_bases
TTTCCGCCAAATAGCGTTTTTATTAATGGACGTCATCCAATTCTATCCGTATACTTGCACCAACAAAGCGATTAGGGAAG
CACTTTCAGGAGGGGCAAGT

Downstream 100 bases:

>100_bases
TTTACGGCATGTCAACAAAAGCTATCTGCAAGGCGACACAGCCTTCCCAGTGCTTAAAGATATCAACTTACACATTGATG
AAGGCGAGTTCGTCGCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNKGRSKGKRISQRMVIIGIGALAMIGVTVFFLVTSKKPTSSPAPTTIATFQVKKHELRVPGQVQAVRTQKIDIPEGTVQ
NMTVKNGDSVTADQQLLTVYKPDVQTKVDEASRALEKQQRSQATLDQQISQIKATLSKTAADDPQKSALQTQLDEAQNNR
QDSADAITQSNQDIAKLKQSLNTVAKAPFAGRLYIDYQANGSQTITETSAEVEAVGEVSEFDYSSVKIGQSATVQALASK
TKQATDINFISSDPAKSSKPNLAKYELTTKLRDGFLNGQSITITIPLSGLLIPKEAVKDGAVFKIVNKRAIRTKVTYVAK
DDMYEVSDGLSSGDRILQKPDKTIKDGAKVNVDD

Sequences:

>Translated_354_residues
MNKGRSKGKRISQRMVIIGIGALAMIGVTVFFLVTSKKPTSSPAPTTIATFQVKKHELRVPGQVQAVRTQKIDIPEGTVQ
NMTVKNGDSVTADQQLLTVYKPDVQTKVDEASRALEKQQRSQATLDQQISQIKATLSKTAADDPQKSALQTQLDEAQNNR
QDSADAITQSNQDIAKLKQSLNTVAKAPFAGRLYIDYQANGSQTITETSAEVEAVGEVSEFDYSSVKIGQSATVQALASK
TKQATDINFISSDPAKSSKPNLAKYELTTKLRDGFLNGQSITITIPLSGLLIPKEAVKDGAVFKIVNKRAIRTKVTYVAK
DDMYEVSDGLSSGDRILQKPDKTIKDGAKVNVDD
>Mature_354_residues
MNKGRSKGKRISQRMVIIGIGALAMIGVTVFFLVTSKKPTSSPAPTTIATFQVKKHELRVPGQVQAVRTQKIDIPEGTVQ
NMTVKNGDSVTADQQLLTVYKPDVQTKVDEASRALEKQQRSQATLDQQISQIKATLSKTAADDPQKSALQTQLDEAQNNR
QDSADAITQSNQDIAKLKQSLNTVAKAPFAGRLYIDYQANGSQTITETSAEVEAVGEVSEFDYSSVKIGQSATVQALASK
TKQATDINFISSDPAKSSKPNLAKYELTTKLRDGFLNGQSITITIPLSGLLIPKEAVKDGAVFKIVNKRAIRTKVTYVAK
DDMYEVSDGLSSGDRILQKPDKTIKDGAKVNVDD

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38363; Mature: 38363

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGRSKGKRISQRMVIIGIGALAMIGVTVFFLVTSKKPTSSPAPTTIATFQVKKHELRV
CCCCHHHHHHHHHEEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEECCCCCC
PGQVQAVRTQKIDIPEGTVQNMTVKNGDSVTADQQLLTVYKPDVQTKVDEASRALEKQQR
CCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHH
SQATLDQQISQIKATLSKTAADDPQKSALQTQLDEAQNNRQDSADAITQSNQDIAKLKQS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHH
LNTVAKAPFAGRLYIDYQANGSQTITETSAEVEAVGEVSEFDYSSVKIGQSATVQALASK
HHHHHCCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCEECCCHHHHHHHHHH
TKQATDINFISSDPAKSSKPNLAKYELTTKLRDGFLNGQSITITIPLSGLLIPKEAVKDG
HHHHCCCEEECCCCCCCCCCCCEEEEHHHHHHHCCCCCCEEEEEEECCCEECCHHHHCCC
AVFKIVNKRAIRTKVTYVAKDDMYEVSDGLSSGDRILQKPDKTIKDGAKVNVDD
CEEEEHHHHHHEEEEEEEECCCCHHHHCCCCCCCHHHHCCCHHHHCCCEEECCC
>Mature Secondary Structure
MNKGRSKGKRISQRMVIIGIGALAMIGVTVFFLVTSKKPTSSPAPTTIATFQVKKHELRV
CCCCHHHHHHHHHEEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEECCCCCC
PGQVQAVRTQKIDIPEGTVQNMTVKNGDSVTADQQLLTVYKPDVQTKVDEASRALEKQQR
CCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHH
SQATLDQQISQIKATLSKTAADDPQKSALQTQLDEAQNNRQDSADAITQSNQDIAKLKQS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHH
LNTVAKAPFAGRLYIDYQANGSQTITETSAEVEAVGEVSEFDYSSVKIGQSATVQALASK
HHHHHCCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCEECCCHHHHHHHHHH
TKQATDINFISSDPAKSSKPNLAKYELTTKLRDGFLNGQSITITIPLSGLLIPKEAVKDG
HHHHCCCEEECCCCCCCCCCCCEEEEHHHHHHHCCCCCCEEEEEEECCCEECCHHHHCCC
AVFKIVNKRAIRTKVTYVAKDDMYEVSDGLSSGDRILQKPDKTIKDGAKVNVDD
CEEEEHHHHHHEEEEEEEECCCCHHHHCCCCCCCHHHHCCCHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA