| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
Click here to switch to the map view.
The map label for this gene is yeaC [H]
Identifier: 116496271
GI number: 116496271
Start: 2834888
End: 2835823
Strand: Direct
Name: yeaC [H]
Synonym: LSEI_2853
Alternate gene names: 116496271
Gene position: 2834888-2835823 (Clockwise)
Preceding gene: 116496269
Following gene: 116496272
Centisome position: 97.91
GC content: 49.47
Gene sequence:
>936_bases ATGGAAGTCAATGAAGCACAAGCCATTTTTGATGCAGCACGGGATCAAGTAGCGACGATTGTGGTGGGCAAATCAATGCC GATCACATTGACTTTCACCGCCTTACTTGCAGGTGGTCATGTGTTGTTCGAGGATATTCCCGGTGTTGGGAAAACCACCC TCGTTCAAGCGATGGCCAAAACCTTAGCGGTGCCATTTTCCCGCATTCAATTCACACCTGATATGCTGCCAAGTGATGTT CTTGGCACATCAATCTTTAATCGGGCCACTAATCAATTCGAATTTCAAAAAGGACCTATTTTTACCAGTATTTTATTAGC AGATGAAATCAATCGCGCCACGCCACGAACACAGGCCGCCTTGTTAGAAGCCATGGGTGAAGGACGGGTTACAACGGATG GTCATACCTATCAGCTAGCCCCTGACTTTTTTGTCATGGCAACTGAGAACCCGACTGATTATGCAGGGACTTACCCGCTC CCTGAAGCACAGTTGGACCGGTTCATGCTTCGCCTCTTACTTGGCTACCCAGATGCTGACGCGGAAAAAAGTTTGCTGCT AACGCCTGATCGTAAAACGATGATTGCTCAATTAACACCTAGACTAGACGCATCGTTACTAGCTGAAGCCAAAAAACTCG TGGCTAACGTGACGGTCAGCGATGCAATCGCCAGTTACGTTCTCGCGCTAGTACAGGCAACCCGACACGACAACCGTGTT CGGCTAGGTATCAGCCCGCGTGGTGGCATTGCCTTGGTCACTGCCGCCAAAGCCTTCGCTACGCTTAACGGACGTACTTA CGTTGATCCAAGCGATATTCAAACGCTACTCGATCCTGTTTTTGGTCATCGGCTCATTGCCAAGGATCCGACACTTTCGA CGGCAACGATCTTAGCAGATATTCTGCAAAACACCGCCGTTCCGATTCGGGGGTGA
Upstream 100 bases:
>100_bases CTATAAACAGCGTTTCACATCTTTCGCCATGCCAGCCGTCAGTTCGCATGCTTGCTGTTTAGCTTTTTTTCGTGAATAAT GACGGCATGGAGGTGTCATG
Downstream 100 bases:
>100_bases GCACATGAACTGGCGCAACTTTTTTATCAATGCTGGCATTTTGCTTGTGCTCAGCCTGCTGATCGTTTTTGGCGTGGCAT TTAACTCATCTACCAGCTGG
Product: MoxR-like ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MEVNEAQAIFDAARDQVATIVVGKSMPITLTFTALLAGGHVLFEDIPGVGKTTLVQAMAKTLAVPFSRIQFTPDMLPSDV LGTSIFNRATNQFEFQKGPIFTSILLADEINRATPRTQAALLEAMGEGRVTTDGHTYQLAPDFFVMATENPTDYAGTYPL PEAQLDRFMLRLLLGYPDADAEKSLLLTPDRKTMIAQLTPRLDASLLAEAKKLVANVTVSDAIASYVLALVQATRHDNRV RLGISPRGGIALVTAAKAFATLNGRTYVDPSDIQTLLDPVFGHRLIAKDPTLSTATILADILQNTAVPIRG
Sequences:
>Translated_311_residues MEVNEAQAIFDAARDQVATIVVGKSMPITLTFTALLAGGHVLFEDIPGVGKTTLVQAMAKTLAVPFSRIQFTPDMLPSDV LGTSIFNRATNQFEFQKGPIFTSILLADEINRATPRTQAALLEAMGEGRVTTDGHTYQLAPDFFVMATENPTDYAGTYPL PEAQLDRFMLRLLLGYPDADAEKSLLLTPDRKTMIAQLTPRLDASLLAEAKKLVANVTVSDAIASYVLALVQATRHDNRV RLGISPRGGIALVTAAKAFATLNGRTYVDPSDIQTLLDPVFGHRLIAKDPTLSTATILADILQNTAVPIRG >Mature_311_residues MEVNEAQAIFDAARDQVATIVVGKSMPITLTFTALLAGGHVLFEDIPGVGKTTLVQAMAKTLAVPFSRIQFTPDMLPSDV LGTSIFNRATNQFEFQKGPIFTSILLADEINRATPRTQAALLEAMGEGRVTTDGHTYQLAPDFFVMATENPTDYAGTYPL PEAQLDRFMLRLLLGYPDADAEKSLLLTPDRKTMIAQLTPRLDASLLAEAKKLVANVTVSDAIASYVLALVQATRHDNRV RLGISPRGGIALVTAAKAFATLNGRTYVDPSDIQTLLDPVFGHRLIAKDPTLSTATILADILQNTAVPIRG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 33537; Mature: 33537
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVNEAQAIFDAARDQVATIVVGKSMPITLTFTALLAGGHVLFEDIPGVGKTTLVQAMAK CCCCHHHHHHHHHHHHEEEEEECCCCCEEEEHHHHHHCCEEEEECCCCCCHHHHHHHHHH TLAVPFSRIQFTPDMLPSDVLGTSIFNRATNQFEFQKGPIFTSILLADEINRATPRTQAA HHHCCHHHEEECCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCHHHHH LLEAMGEGRVTTDGHTYQLAPDFFVMATENPTDYAGTYPLPEAQLDRFMLRLLLGYPDAD HHHHHCCCCEECCCCEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC AEKSLLLTPDRKTMIAQLTPRLDASLLAEAKKLVANVTVSDAIASYVLALVQATRHDNRV CCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEE RLGISPRGGIALVTAAKAFATLNGRTYVDPSDIQTLLDPVFGHRLIAKDPTLSTATILAD EEEECCCCCEEEEEHHHHHHEECCCEEECHHHHHHHHHHHHCCEEEECCCCCHHHHHHHH ILQNTAVPIRG HHHCCCCCCCC >Mature Secondary Structure MEVNEAQAIFDAARDQVATIVVGKSMPITLTFTALLAGGHVLFEDIPGVGKTTLVQAMAK CCCCHHHHHHHHHHHHEEEEEECCCCCEEEEHHHHHHCCEEEEECCCCCCHHHHHHHHHH TLAVPFSRIQFTPDMLPSDVLGTSIFNRATNQFEFQKGPIFTSILLADEINRATPRTQAA HHHCCHHHEEECCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCHHHHH LLEAMGEGRVTTDGHTYQLAPDFFVMATENPTDYAGTYPLPEAQLDRFMLRLLLGYPDAD HHHHHCCCCEECCCCEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC AEKSLLLTPDRKTMIAQLTPRLDASLLAEAKKLVANVTVSDAIASYVLALVQATRHDNRV CCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEE RLGISPRGGIALVTAAKAFATLNGRTYVDPSDIQTLLDPVFGHRLIAKDPTLSTATILAD EEEECCCCCEEEEEHHHHHHEECCCEEECHHHHHHHHHHHHCCEEEECCCCCHHHHHHHH ILQNTAVPIRG HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]