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The map label for this gene is ydbT [H]

Identifier: 116496263

GI number: 116496263

Start: 2825769

End: 2827334

Strand: Direct

Name: ydbT [H]

Synonym: LSEI_2845

Alternate gene names: 116496263

Gene position: 2825769-2827334 (Clockwise)

Preceding gene: 116496262

Following gene: 116496264

Centisome position: 97.6

GC content: 49.43

Gene sequence:

>1566_bases
ATGAAGACTGACCAACCGCAACGACTCGCGCCTGTCGCGCTACTAATTATTTGGATCAGAGGCTTTATTTCGTGGTGGCC
GTTATTTGTTGGCGGAGGGCTTTCAATACTGCGCGCAGACATGAGCTTCAATCAATTTCTATTGTGGGGCGGCCTAATTG
TTGGCGTTTTGGTACTCACCCTCACCTGGTCAATCCTGCATTATTTGCGATTTACCTATCTTGTTGCCCCGAACGGTCTG
ACCATCAACAGTGGTGTGTTGATTCGTAAAGTCAATCACATCCCTTATGACCGTATTCAGACGGTACAACGGCAACAATG
GTTTTTTCTAAAGCCACTAGGTCTCGAACAGGTTGCCATCGAAACAGCTGGCAAAGAATCTAAAAAAGCCGAAGGAATGC
TCTCGGCCGTGCCAGTAGCCGTAGCTGATGCCATCAACCGCTACCGTCAAGGAAACGTTCAGCCAGTGACACCTGATGCG
ACTGATAATCAGGCTATCCCTGCTGCACCCGATCAAACAAGCACCACCGCCGCACCAGCCGCGCCTGTGGCAGATGCGGC
CTATAAAATCAACGGCCATGATCTTAATCAATACGCGCTCACTTCACTAGGCTTCATCCCCATCATTTCCGGGATTCTTT
GGTTAACACAAAAAGCTCAAGAATACCTGCCAGATAGCTGGTACAAGAATGCTGAGCATGCCATCACGGGCTTAGCGGTT
TACCTTATTATCGGTCTGACACTTATTATTCTCATTCTAGGTTTCCTGATCTCCTATTTGAATATTATTCAAAAATACTA
CCACTTCACTTTGGACCGAACCGGTGACGAACTACGAACCAGCCGCGGCTTTTTTCAAACCAATACGGTCAGTGCCCGAC
TGTCACGCTTGCAGGCGGTTCGCTTTAAGCAGAGCATTTTGCGGCAATGGCTGCATCTTAGCACCGTTCAGGCGTTATTA
GCCTCAAGCGCCGCTGATGACCAGCAAAATAATGATCTGGTCCTGATGCCGGTTATCCCAGAACGGCAAGCACTCAGCAG
CATGCGGGCATTCGTCAGCTGGTTGCCGGAAACATCACCGAAACTGCAGCCAATCCCAGTTAGCAACCGCTGGTACTACA
TGCGCAACATGGTCCTAGGTCATCTGACACTACTGGTGTTGCCGGCTGTGCTCGCAAGCGTGTTTTGGTTGCACGTCAGT
TGGTGGCTGTGGCTGGTACTGGCTGGCTTGATTTGGTTAGTCGTCATGGCGTTGCAAGGTCAATATGCGGCAACCACAGC
CGCCATTGCTATTGCGCCACCTAAGCAACTTATCATTCAAGTCGGTGAAATGTGGACAAGGCAACGTTATTTTGTCCGTA
AAAAAGACATTCAAGCCATGACGATCAAACAATCTATCTGGATGAAGGCGCGTGGCGTTGCCCATTTAGAGGTGCATATT
CGCAAAGGCAACAGCGATCAGACAGTCAACTCCCGCTATATGGCCGTTGATTTGGCCAAGCGGATTATGACTTGGTATCA
GCCATTACCATCAGTGCCGCAAGAAGGAGACAATCATGCTGCTTAA

Upstream 100 bases:

>100_bases
ATCGAAACCGCCAGCACCGCCCACGTGATTGATGGTGTGACGCGACCAGTGGCCGACCAATTGCGCAATCAAATCCTCCA
ATTGGCTCAGGAGGCGCGCG

Downstream 100 bases:

>100_bases
TCGTATCCAGTACACCCCGCCAAAATCAAAAACCGCGTATCCATTCAACTTGCCTTGGCAAGCTTCCTTTCGTGACCTGA
CATTGTCGCAACCCGTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MKTDQPQRLAPVALLIIWIRGFISWWPLFVGGGLSILRADMSFNQFLLWGGLIVGVLVLTLTWSILHYLRFTYLVAPNGL
TINSGVLIRKVNHIPYDRIQTVQRQQWFFLKPLGLEQVAIETAGKESKKAEGMLSAVPVAVADAINRYRQGNVQPVTPDA
TDNQAIPAAPDQTSTTAAPAAPVADAAYKINGHDLNQYALTSLGFIPIISGILWLTQKAQEYLPDSWYKNAEHAITGLAV
YLIIGLTLIILILGFLISYLNIIQKYYHFTLDRTGDELRTSRGFFQTNTVSARLSRLQAVRFKQSILRQWLHLSTVQALL
ASSAADDQQNNDLVLMPVIPERQALSSMRAFVSWLPETSPKLQPIPVSNRWYYMRNMVLGHLTLLVLPAVLASVFWLHVS
WWLWLVLAGLIWLVVMALQGQYAATTAAIAIAPPKQLIIQVGEMWTRQRYFVRKKDIQAMTIKQSIWMKARGVAHLEVHI
RKGNSDQTVNSRYMAVDLAKRIMTWYQPLPSVPQEGDNHAA

Sequences:

>Translated_521_residues
MKTDQPQRLAPVALLIIWIRGFISWWPLFVGGGLSILRADMSFNQFLLWGGLIVGVLVLTLTWSILHYLRFTYLVAPNGL
TINSGVLIRKVNHIPYDRIQTVQRQQWFFLKPLGLEQVAIETAGKESKKAEGMLSAVPVAVADAINRYRQGNVQPVTPDA
TDNQAIPAAPDQTSTTAAPAAPVADAAYKINGHDLNQYALTSLGFIPIISGILWLTQKAQEYLPDSWYKNAEHAITGLAV
YLIIGLTLIILILGFLISYLNIIQKYYHFTLDRTGDELRTSRGFFQTNTVSARLSRLQAVRFKQSILRQWLHLSTVQALL
ASSAADDQQNNDLVLMPVIPERQALSSMRAFVSWLPETSPKLQPIPVSNRWYYMRNMVLGHLTLLVLPAVLASVFWLHVS
WWLWLVLAGLIWLVVMALQGQYAATTAAIAIAPPKQLIIQVGEMWTRQRYFVRKKDIQAMTIKQSIWMKARGVAHLEVHI
RKGNSDQTVNSRYMAVDLAKRIMTWYQPLPSVPQEGDNHAA
>Mature_521_residues
MKTDQPQRLAPVALLIIWIRGFISWWPLFVGGGLSILRADMSFNQFLLWGGLIVGVLVLTLTWSILHYLRFTYLVAPNGL
TINSGVLIRKVNHIPYDRIQTVQRQQWFFLKPLGLEQVAIETAGKESKKAEGMLSAVPVAVADAINRYRQGNVQPVTPDA
TDNQAIPAAPDQTSTTAAPAAPVADAAYKINGHDLNQYALTSLGFIPIISGILWLTQKAQEYLPDSWYKNAEHAITGLAV
YLIIGLTLIILILGFLISYLNIIQKYYHFTLDRTGDELRTSRGFFQTNTVSARLSRLQAVRFKQSILRQWLHLSTVQALL
ASSAADDQQNNDLVLMPVIPERQALSSMRAFVSWLPETSPKLQPIPVSNRWYYMRNMVLGHLTLLVLPAVLASVFWLHVS
WWLWLVLAGLIWLVVMALQGQYAATTAAIAIAPPKQLIIQVGEMWTRQRYFVRKKDIQAMTIKQSIWMKARGVAHLEVHI
RKGNSDQTVNSRYMAVDLAKRIMTWYQPLPSVPQEGDNHAA

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 58639; Mature: 58639

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDQPQRLAPVALLIIWIRGFISWWPLFVGGGLSILRADMSFNQFLLWGGLIVGVLVLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHH
LTWSILHYLRFTYLVAPNGLTINSGVLIRKVNHIPYDRIQTVQRQQWFFLKPLGLEQVAI
HHHHHHHHHHHHHEECCCCEEECCCEEEEEECCCCHHHHHHHHHHCCEEECCCCHHHHHH
ETAGKESKKAEGMLSAVPVAVADAINRYRQGNVQPVTPDATDNQAIPAAPDQTSTTAAPA
HHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APVADAAYKINGHDLNQYALTSLGFIPIISGILWLTQKAQEYLPDSWYKNAEHAITGLAV
CCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH
YLIIGLTLIILILGFLISYLNIIQKYYHFTLDRTGDELRTSRGFFQTNTVSARLSRLQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
RFKQSILRQWLHLSTVQALLASSAADDQQNNDLVLMPVIPERQALSSMRAFVSWLPETSP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCC
KLQPIPVSNRWYYMRNMVLGHLTLLVLPAVLASVFWLHVSWWLWLVLAGLIWLVVMALQG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QYAATTAAIAIAPPKQLIIQVGEMWTRQRYFVRKKDIQAMTIKQSIWMKARGVAHLEVHI
CHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEE
RKGNSDQTVNSRYMAVDLAKRIMTWYQPLPSVPQEGDNHAA
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTDQPQRLAPVALLIIWIRGFISWWPLFVGGGLSILRADMSFNQFLLWGGLIVGVLVLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHH
LTWSILHYLRFTYLVAPNGLTINSGVLIRKVNHIPYDRIQTVQRQQWFFLKPLGLEQVAI
HHHHHHHHHHHHHEECCCCEEECCCEEEEEECCCCHHHHHHHHHHCCEEECCCCHHHHHH
ETAGKESKKAEGMLSAVPVAVADAINRYRQGNVQPVTPDATDNQAIPAAPDQTSTTAAPA
HHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APVADAAYKINGHDLNQYALTSLGFIPIISGILWLTQKAQEYLPDSWYKNAEHAITGLAV
CCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH
YLIIGLTLIILILGFLISYLNIIQKYYHFTLDRTGDELRTSRGFFQTNTVSARLSRLQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
RFKQSILRQWLHLSTVQALLASSAADDQQNNDLVLMPVIPERQALSSMRAFVSWLPETSP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCC
KLQPIPVSNRWYYMRNMVLGHLTLLVLPAVLASVFWLHVSWWLWLVLAGLIWLVVMALQG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QYAATTAAIAIAPPKQLIIQVGEMWTRQRYFVRKKDIQAMTIKQSIWMKARGVAHLEVHI
CHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEE
RKGNSDQTVNSRYMAVDLAKRIMTWYQPLPSVPQEGDNHAA
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]