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The map label for this gene is yecS [H]

Identifier: 116496256

GI number: 116496256

Start: 2819071

End: 2820669

Strand: Direct

Name: yecS [H]

Synonym: LSEI_2837

Alternate gene names: 116496256

Gene position: 2819071-2820669 (Clockwise)

Preceding gene: 116496253

Following gene: 116496257

Centisome position: 97.37

GC content: 48.84

Gene sequence:

>1599_bases
ATGAAAAAGCATTGGGTTGCACGTTTAGGCGTGCTGGGGTTCGCCTTGAGCCTCTTACTAGGCAGTTTTGCTGCCACCCC
GGTCAATGCTGCTAGTGATAGCGGCACGTTTAAAGTCGGCATGGAGGCTGGCTATGCGCCATTCAACTGGACGCAAACCA
CCAGCGCTAACAACGCCGTCAAGATTCAAGGTAGTCAGGAATACGCTAACGGCTACGATGTGCAGATTGCACGTAAGGTT
GCCAAAGCCTTACACAAAAAGGTAGTCGTCGTCAAAACATCTTGGGACGGATTGCCACCAGCTCTAACTTCAGGCAAAAT
CGATGCCATCATCGCCGGCATGTCACCGACACCTGATCGTCGCAAGACCATCGATTTCAGTAATCCCTACTACATCTCCA
ACTTGACGATGGTTGTTCGCAAAGACAGCAAGTACGCCAAAGCCAAGAGCATTGCGGATTTTAAGGGTGCTAAAATCACC
GCGCAGCTCAGCACCTATCATTATCAGGCGATCAATCAAATCAAGGGTGTCGTCAAGGAACCGGCTATGAACGATTTTCC
AGCTATGCGTGTGGCCTTGGAATCCGGAACCATTGATGGTTACGTTTCCGAAGTGCCTGAAGGGATCACGGCAGAACGTG
CTAATCCTAACTTGATGTATATCCATTTTGCAAAAGGTCAGGGTTTTAAAACCGATGCCAGTGACACGAATCTGGCGATT
GGCTTGCGCAAGAATGATCCGAATAAAGCAAAGATCAATGAACTACTTGCCACGATTTCAAGTAAAGAACGAGCACAGCT
GATGAATGAAGCTGTCGATAACCAGCCATCAACTGAAAGCAATGGCAACTGGTTCATCGCGATTATGAAGCAATATGGTC
CAATGCTGTTACGCGGGACAGGCATGACCTTACTGATTTCCCTTGTTGGGACAATCGTCGGCTTTATCATCGGGTTGTTA
GTCGGGATTATCCGGACAACTCCTAAGCCGAAAAAACTCGGTCAGCGCGGCTTACGCGCCGTGATCAACTGGCTGCTGTC
GTTGTACATCGAAGTTTTCCGTGGCACGCCAATGATTGTTCAGGCCGCGGTCCTATATTATGGTGCCGCGCAAGCTTGGC
ATTTGAACATGGACCGGACCACCGCTGCCTTATTGATTGTTTCGATCAACACTGGGGCCTATATTTCCGAAATTATCCGT
GGTGGGATTATCTCGGTTGACGAAGGTCAATTCGAGGCTGCCAACGCTCTGGGAATGACCCATCTGCAAACCATGATGAA
GGTCATTTTGCCTCAAGCCGTGCGCAACTCACTGCCAGCTGTGACCAACGAATTTATTGTCAACATCAAGGATACGTCCG
TTCTGTCCGTTATCTCTGTCTCCGAATTGTTCTTCAGTGGTGAGACAATTGCCGGACAAAGCTTCCAATTCTTCCACACC
TATCTGATTGTCAGCGCCATCTATCTCATCATGACCTTCACAATCAGTCGCCTATTCCGATTAATTGAAAAGCATCTCGA
CGGGCCAAAAGATTACAACGTCATGACCAACCAGATGCAGGTCGAAACCCCGAAAACTCGTACGGCAAAGGAGGGCTAA

Upstream 100 bases:

>100_bases
AATCGATGGAATCGACCTTTATTGCGGTATCACAACACAATAAGGTCGATTTTTTGTTTCCAGCTCTATTTCCCACTACA
AGAAGGGAGAAATGTCAGTT

Downstream 100 bases:

>100_bases
TCCATGGCAAACGAACCTTTAATCCAAGTCAAAAATTTAAAAAAGGCCTTTGGCAATCACGAAGTTTTGACCAACATCAA
TCTGGACGTGAATGCCGGTG

Product: amino acid ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKKHWVARLGVLGFALSLLLGSFAATPVNAASDSGTFKVGMEAGYAPFNWTQTTSANNAVKIQGSQEYANGYDVQIARKV
AKALHKKVVVVKTSWDGLPPALTSGKIDAIIAGMSPTPDRRKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKIT
AQLSTYHYQAINQIKGVVKEPAMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKGQGFKTDASDTNLAI
GLRKNDPNKAKINELLATISSKERAQLMNEAVDNQPSTESNGNWFIAIMKQYGPMLLRGTGMTLLISLVGTIVGFIIGLL
VGIIRTTPKPKKLGQRGLRAVINWLLSLYIEVFRGTPMIVQAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIR
GGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSELFFSGETIAGQSFQFFHT
YLIVSAIYLIMTFTISRLFRLIEKHLDGPKDYNVMTNQMQVETPKTRTAKEG

Sequences:

>Translated_532_residues
MKKHWVARLGVLGFALSLLLGSFAATPVNAASDSGTFKVGMEAGYAPFNWTQTTSANNAVKIQGSQEYANGYDVQIARKV
AKALHKKVVVVKTSWDGLPPALTSGKIDAIIAGMSPTPDRRKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKIT
AQLSTYHYQAINQIKGVVKEPAMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKGQGFKTDASDTNLAI
GLRKNDPNKAKINELLATISSKERAQLMNEAVDNQPSTESNGNWFIAIMKQYGPMLLRGTGMTLLISLVGTIVGFIIGLL
VGIIRTTPKPKKLGQRGLRAVINWLLSLYIEVFRGTPMIVQAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIR
GGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSELFFSGETIAGQSFQFFHT
YLIVSAIYLIMTFTISRLFRLIEKHLDGPKDYNVMTNQMQVETPKTRTAKEG
>Mature_532_residues
MKKHWVARLGVLGFALSLLLGSFAATPVNAASDSGTFKVGMEAGYAPFNWTQTTSANNAVKIQGSQEYANGYDVQIARKV
AKALHKKVVVVKTSWDGLPPALTSGKIDAIIAGMSPTPDRRKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKIT
AQLSTYHYQAINQIKGVVKEPAMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKGQGFKTDASDTNLAI
GLRKNDPNKAKINELLATISSKERAQLMNEAVDNQPSTESNGNWFIAIMKQYGPMLLRGTGMTLLISLVGTIVGFIIGLL
VGIIRTTPKPKKLGQRGLRAVINWLLSLYIEVFRGTPMIVQAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIR
GGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSELFFSGETIAGQSFQFFHT
YLIVSAIYLIMTFTISRLFRLIEKHLDGPKDYNVMTNQMQVETPKTRTAKEG

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=39.2523364485981, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=38.6046511627907, Blast_Score=142, Evalue=6e-35,
Organism=Escherichia coli, GI1787086, Length=225, Percent_Identity=30.2222222222222, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=30, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788645, Length=238, Percent_Identity=28.9915966386555, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI87082239, Length=228, Percent_Identity=29.3859649122807, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1787087, Length=243, Percent_Identity=24.6913580246914, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1787085, Length=201, Percent_Identity=27.8606965174129, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788228, Length=268, Percent_Identity=26.4925373134328, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1787088, Length=263, Percent_Identity=26.9961977186312, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI48994930, Length=167, Percent_Identity=31.7365269461078, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786874, Length=225, Percent_Identity=25.3333333333333, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788646, Length=228, Percent_Identity=23.2456140350877, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 58178; Mature: 58178

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHWVARLGVLGFALSLLLGSFAATPVNAASDSGTFKVGMEAGYAPFNWTQTTSANNAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEE
KIQGSQEYANGYDVQIARKVAKALHKKVVVVKTSWDGLPPALTSGKIDAIIAGMSPTPDR
EEECCHHHCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC
RKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKITAQLSTYHYQAINQIKGVVKE
CCEECCCCCEEEECEEEEEECCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCC
PAMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKGQGFKTDASDTNLAI
CCCCCCCHHEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEE
GLRKNDPNKAKINELLATISSKERAQLMNEAVDNQPSTESNGNWFIAIMKQYGPMLLRGT
EEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCEEEECC
GMTLLISLVGTIVGFIIGLLVGIIRTTPKPKKLGQRGLRAVINWLLSLYIEVFRGTPMIV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIRGGIISVDEGQFEAANALGMT
HHHHHHHCCCCEEEECCCCCEEEEEEEEECCCHHHHHHHCCCCEEECCCCCHHHHHHHHH
HLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSELFFSGETIAGQSFQFFHT
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
YLIVSAIYLIMTFTISRLFRLIEKHLDGPKDYNVMTNQMQVETPKTRTAKEG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECEEEEECCCCCCCCCC
>Mature Secondary Structure
MKKHWVARLGVLGFALSLLLGSFAATPVNAASDSGTFKVGMEAGYAPFNWTQTTSANNAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEE
KIQGSQEYANGYDVQIARKVAKALHKKVVVVKTSWDGLPPALTSGKIDAIIAGMSPTPDR
EEECCHHHCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC
RKTIDFSNPYYISNLTMVVRKDSKYAKAKSIADFKGAKITAQLSTYHYQAINQIKGVVKE
CCEECCCCCEEEECEEEEEECCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCC
PAMNDFPAMRVALESGTIDGYVSEVPEGITAERANPNLMYIHFAKGQGFKTDASDTNLAI
CCCCCCCHHEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEE
GLRKNDPNKAKINELLATISSKERAQLMNEAVDNQPSTESNGNWFIAIMKQYGPMLLRGT
EEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCEEEECC
GMTLLISLVGTIVGFIIGLLVGIIRTTPKPKKLGQRGLRAVINWLLSLYIEVFRGTPMIV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QAAVLYYGAAQAWHLNMDRTTAALLIVSINTGAYISEIIRGGIISVDEGQFEAANALGMT
HHHHHHHCCCCEEEECCCCCEEEEEEEEECCCHHHHHHHCCCCEEECCCCCHHHHHHHHH
HLQTMMKVILPQAVRNSLPAVTNEFIVNIKDTSVLSVISVSELFFSGETIAGQSFQFFHT
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
YLIVSAIYLIMTFTISRLFRLIEKHLDGPKDYNVMTNQMQVETPKTRTAKEG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]