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The map label for this gene is yraK [H]

Identifier: 116496231

GI number: 116496231

Start: 2792259

End: 2792933

Strand: Direct

Name: yraK [H]

Synonym: LSEI_2809

Alternate gene names: 116496231

Gene position: 2792259-2792933 (Clockwise)

Preceding gene: 116496220

Following gene: 116496232

Centisome position: 96.44

GC content: 49.19

Gene sequence:

>675_bases
ATGTTCTTTTATCATGATCAGCTCAGGCTTTACTATCAACGGCGCGGTTCGGGACCAGTGATCGTGTTGTTGCATGGGAA
TGGTGAGGACCATACGATTTTTGCTAACCTGATTGAGCAATTGGCACCGCTGTATACGGTGATTGCAGTGGATAGTCGCG
ATCATGGTCAGAGTTCGCGGACGAATCGCTTGAGTTATGATGCGATGACGGCAGATTTAGCGGCCCTGATCACTGGCTTG
GAGCTTGAGCAGCCGATTTTACTTGGCTTTTCTGATGGCGCGATTGTGGCATTGCAGTTGGCGATTCGTCAACCCCAGTT
AGCCGGCGCTTTAATTCTTGCTGGGGCGAATCTGACCCCGCAAGGTTTACGCTGGTATTCGCGAGTTGCTTTTCGGGTTG
CTGCTGGTTACCATCCGTCACCTAAAATGGCAATGATGCTCCATGAACCGCAAATCACACCGGCCATGTTGCATCGGGTG
GCCATACCAACATTGGTCCTTGCAGGCAGTCGTGACTTGATTGCACGAAAAGAAACGCTCACCATTGCGACTAATATTCA
AAACGCCGAGCTGCATATTCTTCCCGGTGAAAATCACAATTCGTACATCAAAGACAACGCGAAACTCTGGCAATTGATTC
GGCCTTTTCTTGCTGGTTTAAACAGAACAGACTAA

Upstream 100 bases:

>100_bases
AAAACCACCCGCTTAAGGAAAATTTCAGTGCTGAGCGCATCGCTATTCCGGTGCTTGCCGACATTTAATCACCCAATTAT
GAATTTTGGAGGTTGCTAAT

Downstream 100 bases:

>100_bases
AGTTTAGTCTGTATTTTTTTTGCATATTTAACATTTTCCTTGCATATTCATATAAATGAGTATATATTCAATCCATAATC
ACAAATGAGGAGTGAAACAT

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MFFYHDQLRLYYQRRGSGPVIVLLHGNGEDHTIFANLIEQLAPLYTVIAVDSRDHGQSSRTNRLSYDAMTADLAALITGL
ELEQPILLGFSDGAIVALQLAIRQPQLAGALILAGANLTPQGLRWYSRVAFRVAAGYHPSPKMAMMLHEPQITPAMLHRV
AIPTLVLAGSRDLIARKETLTIATNIQNAELHILPGENHNSYIKDNAKLWQLIRPFLAGLNRTD

Sequences:

>Translated_224_residues
MFFYHDQLRLYYQRRGSGPVIVLLHGNGEDHTIFANLIEQLAPLYTVIAVDSRDHGQSSRTNRLSYDAMTADLAALITGL
ELEQPILLGFSDGAIVALQLAIRQPQLAGALILAGANLTPQGLRWYSRVAFRVAAGYHPSPKMAMMLHEPQITPAMLHRV
AIPTLVLAGSRDLIARKETLTIATNIQNAELHILPGENHNSYIKDNAKLWQLIRPFLAGLNRTD
>Mature_224_residues
MFFYHDQLRLYYQRRGSGPVIVLLHGNGEDHTIFANLIEQLAPLYTVIAVDSRDHGQSSRTNRLSYDAMTADLAALITGL
ELEQPILLGFSDGAIVALQLAIRQPQLAGALILAGANLTPQGLRWYSRVAFRVAAGYHPSPKMAMMLHEPQITPAMLHRV
AIPTLVLAGSRDLIARKETLTIATNIQNAELHILPGENHNSYIKDNAKLWQLIRPFLAGLNRTD

Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 24822; Mature: 24822

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFYHDQLRLYYQRRGSGPVIVLLHGNGEDHTIFANLIEQLAPLYTVIAVDSRDHGQSSR
CEEEEHHHHEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCC
TNRLSYDAMTADLAALITGLELEQPILLGFSDGAIVALQLAIRQPQLAGALILAGANLTP
CCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCH
QGLRWYSRVAFRVAAGYHPSPKMAMMLHEPQITPAMLHRVAIPTLVLAGSRDLIARKETL
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHEEEECCCHHEECCEEE
TIATNIQNAELHILPGENHNSYIKDNAKLWQLIRPFLAGLNRTD
EEEECCCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFFYHDQLRLYYQRRGSGPVIVLLHGNGEDHTIFANLIEQLAPLYTVIAVDSRDHGQSSR
CEEEEHHHHEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCC
TNRLSYDAMTADLAALITGLELEQPILLGFSDGAIVALQLAIRQPQLAGALILAGANLTP
CCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCH
QGLRWYSRVAFRVAAGYHPSPKMAMMLHEPQITPAMLHRVAIPTLVLAGSRDLIARKETL
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHEEEECCCHHEECCEEE
TIATNIQNAELHILPGENHNSYIKDNAKLWQLIRPFLAGLNRTD
EEEECCCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9308178; 9384377 [H]