| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116496192
Identifier: 116496192
GI number: 116496192
Start: 2754629
End: 2754862
Strand: Direct
Name: 116496192
Synonym: LSEI_2770
Alternate gene names: NA
Gene position: 2754629-2754862 (Clockwise)
Preceding gene: 116496191
Following gene: 116496202
Centisome position: 95.14
GC content: 52.56
Gene sequence:
>234_bases TTGGCCAGATGGGACTCAGCCGTGCAAACAACACAGCGACGGGCCTTGGAGCTGATGTTGTTAGGCGACTTCGAGACCGG TTTTTGGGCTCGAAGCGCCGTCTCCGCTCTAGCTTCGCGTCGCCACCCCAGCTGGCCGGAGATTGCGGAGTTTGGCACGG CAAAGAAAATCCTGTCTAACATCTTTTGTATCCCGCGTAAAATTGTCCTTCCAAAATCATTAACACCTTTATAA
Upstream 100 bases:
>100_bases AAGAACGAATGAGTTTTCTCAAATAGGGGAAACTTATTCGTTCTTTCTTATATATAAATGAATAGGATTTAAAGATTCCA GTACCAAGGGGGAGCAATCG
Downstream 100 bases:
>100_bases ATCACTCAACCTCACAAAAACCGATCCCGTTTTTCCTGAAAAGCTTGCACAATAAGGTGCCCAACCTGTTGACCAAATTG CATAGCCGTCTGCCGATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MARWDSAVQTTQRRALELMLLGDFETGFWARSAVSALASRRHPSWPEIAEFGTAKKILSNIFCIPRKIVLPKSLTPL
Sequences:
>Translated_77_residues MARWDSAVQTTQRRALELMLLGDFETGFWARSAVSALASRRHPSWPEIAEFGTAKKILSNIFCIPRKIVLPKSLTPL >Mature_76_residues ARWDSAVQTTQRRALELMLLGDFETGFWARSAVSALASRRHPSWPEIAEFGTAKKILSNIFCIPRKIVLPKSLTPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8684; Mature: 8553
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARWDSAVQTTQRRALELMLLGDFETGFWARSAVSALASRRHPSWPEIAEFGTAKKILSN CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH IFCIPRKIVLPKSLTPL HHHCCCCCCCCCCCCCC >Mature Secondary Structure ARWDSAVQTTQRRALELMLLGDFETGFWARSAVSALASRRHPSWPEIAEFGTAKKILSN CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH IFCIPRKIVLPKSLTPL HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA