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The map label for this gene is glvR [H]

Identifier: 116496083

GI number: 116496083

Start: 2640065

End: 2640817

Strand: Direct

Name: glvR [H]

Synonym: LSEI_2656

Alternate gene names: 116496083

Gene position: 2640065-2640817 (Clockwise)

Preceding gene: 116496078

Following gene: 116496097

Centisome position: 91.19

GC content: 46.61

Gene sequence:

>753_bases
ATGGCTACACTCAGTCCCACCGAAGCGTACCTTTGGGATTACATTGAAAATCATCAGCAAGCCGTCGTTAACGCATCCAT
CACCCAACTCAGTACTGCGGCCAATGTCTCTCCTGCCACCGTTGTTCGCACCATGAAGAAAAAGGGGTTTAATGGCTATA
CCGATTTCCGCCACGATTTGCTAAAACGCACAGGCGATGCCGCACCGTTCAGCATTCTTGAACAAGTTGACGACCAAATC
AAAAAAGTCATTATGCAAAACCAAGTGGAAGTCTATAATACGCTGGAAAATTTGAAGGTTTCTGTCATTGAAGACTCGGT
TCAATTGCTAGCTAAGGCCGAAATCGTCCTGATTCTTGCGCGCGGCTTATCTGAATCAATTGCGTCGGAAGTCACTTTGA
AATTGCAGCTCTTAGGTAAATACGCCGAGTTTTTTAGTGATCCGAATATCATTCAAACGATTGCCGGTCAGGTCAGCTCG
AAGGCAGTCGCCATTACTATCACGTTGAATGGCGAAACCCCAGAGCTTGTTGCTGCAGCGAAAACTTTGGCAGCGCGCGA
CATTCCGCAAATCATTTTGACAACCAACGCAGAAGCGCCAATTGTCCAATATGCCGATGAGTTATTTGTCGGGTACAAAT
CCAAAGCCGCTTACTTCGACAAATATGAGGTGGCATCACGCCTGCCGCTGCAAGTTATGAGCCGTATTTTGCTGGATAGT
TATGTTGTGCGGAAACGTGGGCAGAAAAGTTAA

Upstream 100 bases:

>100_bases
TTTTGCTTATCCTTATGTTAACCGCTTTCAGCCGAAAACGGTTTTCAGTTTCAGGCGAATCTACGCCAGTACTGAAAATG
CTTTTCAGGAGGTCAAATTC

Downstream 100 bases:

>100_bases
CGGTCACTAGCAGGCTTTGATAACTTGCTCGTAACCACATAAAAAGGCAATGATCACTTGAGAAAACAGTGATCATTGCC
TTTTTCACTTCATCCAACCA

Product: transcriptional regulator

Products: NA

Alternate protein names: Glv operon regulatory protein [H]

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MATLSPTEAYLWDYIENHQQAVVNASITQLSTAANVSPATVVRTMKKKGFNGYTDFRHDLLKRTGDAAPFSILEQVDDQI
KKVIMQNQVEVYNTLENLKVSVIEDSVQLLAKAEIVLILARGLSESIASEVTLKLQLLGKYAEFFSDPNIIQTIAGQVSS
KAVAITITLNGETPELVAAAKTLAARDIPQIILTTNAEAPIVQYADELFVGYKSKAAYFDKYEVASRLPLQVMSRILLDS
YVVRKRGQKS

Sequences:

>Translated_250_residues
MATLSPTEAYLWDYIENHQQAVVNASITQLSTAANVSPATVVRTMKKKGFNGYTDFRHDLLKRTGDAAPFSILEQVDDQI
KKVIMQNQVEVYNTLENLKVSVIEDSVQLLAKAEIVLILARGLSESIASEVTLKLQLLGKYAEFFSDPNIIQTIAGQVSS
KAVAITITLNGETPELVAAAKTLAARDIPQIILTTNAEAPIVQYADELFVGYKSKAAYFDKYEVASRLPLQVMSRILLDS
YVVRKRGQKS
>Mature_249_residues
ATLSPTEAYLWDYIENHQQAVVNASITQLSTAANVSPATVVRTMKKKGFNGYTDFRHDLLKRTGDAAPFSILEQVDDQIK
KVIMQNQVEVYNTLENLKVSVIEDSVQLLAKAEIVLILARGLSESIASEVTLKLQLLGKYAEFFSDPNIIQTIAGQVSSK
AVAITITLNGETPELVAAAKTLAARDIPQIILTTNAEAPIVQYADELFVGYKSKAAYFDKYEVASRLPLQVMSRILLDSY
VVRKRGQKS

Specific function: Positive regulator of the glv operon expression, which consists of glvA, glvR and glvC [H]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 27570; Mature: 27439

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLSPTEAYLWDYIENHQQAVVNASITQLSTAANVSPATVVRTMKKKGFNGYTDFRHDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH
LKRTGDAAPFSILEQVDDQIKKVIMQNQVEVYNTLENLKVSVIEDSVQLLAKAEIVLILA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLSESIASEVTLKLQLLGKYAEFFSDPNIIQTIAGQVSSKAVAITITLNGETPELVAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHH
KTLAARDIPQIILTTNAEAPIVQYADELFVGYKSKAAYFDKYEVASRLPLQVMSRILLDS
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
YVVRKRGQKS
HHHHHCCCCC
>Mature Secondary Structure 
ATLSPTEAYLWDYIENHQQAVVNASITQLSTAANVSPATVVRTMKKKGFNGYTDFRHDL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH
LKRTGDAAPFSILEQVDDQIKKVIMQNQVEVYNTLENLKVSVIEDSVQLLAKAEIVLILA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLSESIASEVTLKLQLLGKYAEFFSDPNIIQTIAGQVSSKAVAITITLNGETPELVAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHH
KTLAARDIPQIILTTNAEAPIVQYADELFVGYKSKAAYFDKYEVASRLPLQVMSRILLDS
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
YVVRKRGQKS
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377; 11489864 [H]