Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116496038

Identifier: 116496038

GI number: 116496038

Start: 2592183

End: 2592329

Strand: Direct

Name: 116496038

Synonym: LSEI_2610

Alternate gene names: NA

Gene position: 2592183-2592329 (Clockwise)

Preceding gene: 116496031

Following gene: 116496040

Centisome position: 89.53

GC content: 41.5

Gene sequence:

>147_bases
ATGAAGTCATTTCGGTGGTCACACGTTATTAGTTATCTGATCATGGTCATCGTCCTTGTTTTCTTTGCCTTCGTCCTTTA
TCAGGTCATCATGCTCGGTGTTCATTCCGTTTCCAATAGTTTCTTCATCAACTTTGGCCGGCATTAA

Upstream 100 bases:

>100_bases
ATATTTCAAGTTGCGTTTGAATGGTTCACATGCGCTATTAATTTAAATCAAAAAAGGTGTAACATAACAGTAGAAATACT
TTCAGAAAGGAGTCTTGATC

Downstream 100 bases:

>100_bases
CGAATCGTGTAGTCGAGCCGATACTGCGTCAGAATGTCATTCAGCGATTGTTGATACAACTGCTGAAAGGCTTCTGGCGT
TGTTTCTTTTTGTGGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MKSFRWSHVISYLIMVIVLVFFAFVLYQVIMLGVHSVSNSFFINFGRH

Sequences:

>Translated_48_residues
MKSFRWSHVISYLIMVIVLVFFAFVLYQVIMLGVHSVSNSFFINFGRH
>Mature_48_residues
MKSFRWSHVISYLIMVIVLVFFAFVLYQVIMLGVHSVSNSFFINFGRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5682; Mature: 5682

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFRWSHVISYLIMVIVLVFFAFVLYQVIMLGVHSVSNSFFINFGRH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCC
>Mature Secondary Structure
MKSFRWSHVISYLIMVIVLVFFAFVLYQVIMLGVHSVSNSFFINFGRH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA