Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is 116495999

Identifier: 116495999

GI number: 116495999

Start: 2549424

End: 2549510

Strand: Direct

Name: 116495999

Synonym: LSEI_2568

Alternate gene names: NA

Gene position: 2549424-2549510 (Clockwise)

Preceding gene: 116495998

Following gene: 116496006

Centisome position: 88.05

GC content: 48.28

Gene sequence:

>87_bases
TTGCGGCTGCCTTTTTGGTCGCTTGTGATGCGTCAAACTGATGATCGTGCAGATAATGACAAAGCGCTGATAGCCTCTGA
AACGTGA

Upstream 100 bases:

>100_bases
AAGCTTGAACAACAAATTCTGTCCGGCCCAGAGGTAGAAGATTTGATTGATAATGTGATGCCAAAAGCGAAATGATTTTT
GATGTCAAAAGGCAGCCGGA

Downstream 100 bases:

>100_bases
GAAAAGGCACAACGCAACTAAAGATATCTTTTCTTGCTCAACAAAAAAACCACCACGAGGGTGGAAAAGTTTGGGGGAAC
TTTTTTGGGAGTGTAAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 28; Mature: 28

Protein sequence:

>28_residues
MRLPFWSLVMRQTDDRADNDKALIASET

Sequences:

>Translated_28_residues
MRLPFWSLVMRQTDDRADNDKALIASET
>Mature_28_residues
MRLPFWSLVMRQTDDRADNDKALIASET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3281; Mature: 3281

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPFWSLVMRQTDDRADNDKALIASET
CCCCHHHHHHHCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MRLPFWSLVMRQTDDRADNDKALIASET
CCCCHHHHHHHCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA