| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495884
Identifier: 116495884
GI number: 116495884
Start: 2428352
End: 2428516
Strand: Direct
Name: 116495884
Synonym: LSEI_2440
Alternate gene names: NA
Gene position: 2428352-2428516 (Clockwise)
Preceding gene: 116495878
Following gene: 116495888
Centisome position: 83.87
GC content: 36.36
Gene sequence:
>165_bases TTGAAAACTCTTTCCAAGATTGCTCATATCGTCAGTGCCTTGTCAGGCGTTATTTTAGTCATCACCATCATTTCCATTCC AAAATACGACAGTATGGCACTGAATGTGTTTATTCTGACAGTCTCAGCAACAATGATTATTGATAACTATAGTCGAGAAT ACTAA
Upstream 100 bases:
>100_bases AATTATTAACGAATACTGAACTCTGCAAGGTAAACGGTGGTAGTAACGCTCTTGACTGTGCTGCAGGAGTCGGTGCTAGC CCACGAAGGAGACTGATTTT
Downstream 100 bases:
>100_bases GACAAATTTTTAATAAAGTTCCATTCTCTCAGAATTTCACAAATTAAATACCTTGCCACTAACAACAGCCTCTACTTTGC AGCAATTCGCAAGCAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MKTLSKIAHIVSALSGVILVITIISIPKYDSMALNVFILTVSATMIIDNYSREY
Sequences:
>Translated_54_residues MKTLSKIAHIVSALSGVILVITIISIPKYDSMALNVFILTVSATMIIDNYSREY >Mature_54_residues MKTLSKIAHIVSALSGVILVITIISIPKYDSMALNVFILTVSATMIIDNYSREY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5959; Mature: 5959
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSKIAHIVSALSGVILVITIISIPKYDSMALNVFILTVSATMIIDNYSREY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKTLSKIAHIVSALSGVILVITIISIPKYDSMALNVFILTVSATMIIDNYSREY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA