Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495684

Identifier: 116495684

GI number: 116495684

Start: 2224376

End: 2224870

Strand: Direct

Name: 116495684

Synonym: LSEI_2231

Alternate gene names: NA

Gene position: 2224376-2224870 (Clockwise)

Preceding gene: 116495683

Following gene: 116495685

Centisome position: 76.83

GC content: 47.27

Gene sequence:

>495_bases
ATGATTATCTTGTTATTGATCGTCGGTGCGCTTGCCTTTTTCTGGGCTGTTGTGTTAATGCAACCAAGTCGGCGCCGTCA
ATTAACGATCTGGGTAAGCGCGGGACTTGTCTTGGCCCCCATCCTATTGTTAAGCGTGAATGACCTTTATCACGTTGGCT
TCACTATTGACGAAACCACTGAACTGCAGCCATTAGCACCGATGGACGACCAGTTGCAAATTTCGCGGCGGCCCATTGGC
AAGGCAAAAAAGCATTTCAGCTATCGTTACCTTATCATTTCCGATGCAACCGTTCATACCGCTACACCTAGTACCACGGT
CTCAACTCGCATCGAACACGGCACCATTCCGCAAGTTGCAGTGACAACTCAGAAGCTGACTTATAGCAATGCGCTAACCG
CTATTTTGTTTGCTGGATCAGGCGAACAAGGTAAAGCAATTGGCAAAATTTACACCTTCACACTGCCAGCAAATTGGCAG
ATTGTTGATCAGTAA

Upstream 100 bases:

>100_bases
GTTATCGCGCGGCTTTTGCCGTCTCACTAGTCATGGCAGCGCTTGGTCTCGTTCTCAGCTTATTTTTGAAAACAGACGTC
ATTGATCGGAGGGACGCCTC

Downstream 100 bases:

>100_bases
ACGCCATCTTGCACTCGCAGAAACCGATTCACGTTCCGTCATCACGCACTCGCCAGCACAAAAATTTGAAGCTGAGCCAT
ACACTTATGATTTGTTAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MIILLLIVGALAFFWAVVLMQPSRRRQLTIWVSAGLVLAPILLLSVNDLYHVGFTIDETTELQPLAPMDDQLQISRRPIG
KAKKHFSYRYLIISDATVHTATPSTTVSTRIEHGTIPQVAVTTQKLTYSNALTAILFAGSGEQGKAIGKIYTFTLPANWQ
IVDQ

Sequences:

>Translated_164_residues
MIILLLIVGALAFFWAVVLMQPSRRRQLTIWVSAGLVLAPILLLSVNDLYHVGFTIDETTELQPLAPMDDQLQISRRPIG
KAKKHFSYRYLIISDATVHTATPSTTVSTRIEHGTIPQVAVTTQKLTYSNALTAILFAGSGEQGKAIGKIYTFTLPANWQ
IVDQ
>Mature_164_residues
MIILLLIVGALAFFWAVVLMQPSRRRQLTIWVSAGLVLAPILLLSVNDLYHVGFTIDETTELQPLAPMDDQLQISRRPIG
KAKKHFSYRYLIISDATVHTATPSTTVSTRIEHGTIPQVAVTTQKLTYSNALTAILFAGSGEQGKAIGKIYTFTLPANWQ
IVDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18120; Mature: 18120

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILLLIVGALAFFWAVVLMQPSRRRQLTIWVSAGLVLAPILLLSVNDLYHVGFTIDETT
CEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCC
ELQPLAPMDDQLQISRRPIGKAKKHFSYRYLIISDATVHTATPSTTVSTRIEHGTIPQVA
CCCCCCCCCCCEEECCCCCCCHHHCCEEEEEEEECCEEEECCCCCEEEEEECCCCCCEEE
VTTQKLTYSNALTAILFAGSGEQGKAIGKIYTFTLPANWQIVDQ
EEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEEECCCEEEECC
>Mature Secondary Structure
MIILLLIVGALAFFWAVVLMQPSRRRQLTIWVSAGLVLAPILLLSVNDLYHVGFTIDETT
CEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCC
ELQPLAPMDDQLQISRRPIGKAKKHFSYRYLIISDATVHTATPSTTVSTRIEHGTIPQVA
CCCCCCCCCCCEEECCCCCCCHHHCCEEEEEEEECCEEEECCCCCEEEEEECCCCCCEEE
VTTQKLTYSNALTAILFAGSGEQGKAIGKIYTFTLPANWQIVDQ
EEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA