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The map label for this gene is yhcG [H]

Identifier: 116495631

GI number: 116495631

Start: 2167309

End: 2167914

Strand: Direct

Name: yhcG [H]

Synonym: LSEI_2176

Alternate gene names: 116495631

Gene position: 2167309-2167914 (Clockwise)

Preceding gene: 116495630

Following gene: 116495633

Centisome position: 74.86

GC content: 44.55

Gene sequence:

>606_bases
ATGACAACTGATCTGCTAACCGTTACGAACTTGACCAAACGCTATGCCGATTATCAACTTGCTAATGTCAGTTTTAGTTT
ACCCGCTGGCTACATCATGGGCTTCATTGGTCCCAATGGTGCAGGCAAAACGACCACAATCAAAGCCATTTTGGATATGA
TCAAACCAGACTCAGGTAACATTTCGGTACTTGGTCAAACCACGCCACAAGCCCGCGAAGCGATTCGCGATCAACTTGGG
ATTGTTTTAGATGGCGCGGTTTATCCTGACTCATGGCCAGCAGAAGCTGTCAATCGATATGTTGGACCGTTTTTTCCTAA
TTGGGACACGGCTTATTTCCAGCAACTGCTGCGTGACTTTGATATTCCAACCAAGCCTAAATATCACGATTTGTCGATGG
GCACCAAAATCAAGTTACAGTTAGCGGCCGCTTTGGCACATCATCCTAAGCTCTTGATCCTAGATGAGCCCACTTCTGGC
TTAGATCCGATTGCGCGTGATGAATTGATTGCCATTCTGCAAGATTTTATTCGCGATGAGCAACACAGCGTTCTTATGGT
AGATTGCAAATTTAATCCGAATTTTTGGACAAATTTGTCAGCATAA

Upstream 100 bases:

>100_bases
CTGAATCAAGCCATCGATACTGCCAAAATGGCGCGCATTGCACCTGAAGAACTACACACGATGTTGGATACATTGATGCA
CACGGAGGGAGACACTGACA

Downstream 100 bases:

>100_bases
CCTGATACGGTGTTTGCCAGTCGAGTATTTTAAGCGGTCGCTGGTTAATTTGGAGTAACGTCGTCGTTAAATCTTGAGCA
CTAATGTGCTCAAAACGAGT

Product: ABC-type multidrug transport system, ATPase component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTTDLLTVTNLTKRYADYQLANVSFSLPAGYIMGFIGPNGAGKTTTIKAILDMIKPDSGNISVLGQTTPQAREAIRDQLG
IVLDGAVYPDSWPAEAVNRYVGPFFPNWDTAYFQQLLRDFDIPTKPKYHDLSMGTKIKLQLAAALAHHPKLLILDEPTSG
LDPIARDELIAILQDFIRDEQHSVLMVDCKFNPNFWTNLSA

Sequences:

>Translated_201_residues
MTTDLLTVTNLTKRYADYQLANVSFSLPAGYIMGFIGPNGAGKTTTIKAILDMIKPDSGNISVLGQTTPQAREAIRDQLG
IVLDGAVYPDSWPAEAVNRYVGPFFPNWDTAYFQQLLRDFDIPTKPKYHDLSMGTKIKLQLAAALAHHPKLLILDEPTSG
LDPIARDELIAILQDFIRDEQHSVLMVDCKFNPNFWTNLSA
>Mature_200_residues
TTDLLTVTNLTKRYADYQLANVSFSLPAGYIMGFIGPNGAGKTTTIKAILDMIKPDSGNISVLGQTTPQAREAIRDQLGI
VLDGAVYPDSWPAEAVNRYVGPFFPNWDTAYFQQLLRDFDIPTKPKYHDLSMGTKIKLQLAAALAHHPKLLILDEPTSGL
DPIARDELIAILQDFIRDEQHSVLMVDCKFNPNFWTNLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI21536376, Length=181, Percent_Identity=30.939226519337, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI45446740, Length=174, Percent_Identity=31.0344827586207, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI47078218, Length=174, Percent_Identity=31.0344827586207, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI27436953, Length=191, Percent_Identity=27.2251308900524, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI31657092, Length=177, Percent_Identity=29.3785310734463, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI27881501, Length=155, Percent_Identity=28.3870967741935, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI30795238, Length=155, Percent_Identity=28.3870967741935, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI150417984, Length=174, Percent_Identity=30.4597701149425, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI105990541, Length=150, Percent_Identity=32, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI27262624, Length=154, Percent_Identity=30.5194805194805, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI27262626, Length=154, Percent_Identity=30.5194805194805, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI171184400, Length=157, Percent_Identity=31.2101910828025, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87081782, Length=193, Percent_Identity=30.0518134715026, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI48994997, Length=203, Percent_Identity=31.5270935960591, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786319, Length=168, Percent_Identity=34.5238095238095, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI48994943, Length=183, Percent_Identity=28.4153005464481, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1786398, Length=209, Percent_Identity=29.1866028708134, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787029, Length=187, Percent_Identity=28.8770053475936, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI87081834, Length=202, Percent_Identity=28.2178217821782, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI2367384, Length=175, Percent_Identity=34.8571428571429, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081791, Length=204, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI1786698, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI1788472, Length=189, Percent_Identity=27.5132275132275, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1786803, Length=194, Percent_Identity=24.7422680412371, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081709, Length=185, Percent_Identity=27.5675675675676, Blast_Score=64, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24650855, Length=186, Percent_Identity=31.7204301075269, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24650853, Length=180, Percent_Identity=30.5555555555556, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI116007328, Length=206, Percent_Identity=32.5242718446602, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28574150, Length=206, Percent_Identity=32.5242718446602, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI281362751, Length=180, Percent_Identity=30.5555555555556, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24643674, Length=175, Percent_Identity=30.8571428571429, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24582014, Length=172, Percent_Identity=26.1627906976744, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24582012, Length=172, Percent_Identity=26.1627906976744, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 22325; Mature: 22194

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDLLTVTNLTKRYADYQLANVSFSLPAGYIMGFIGPNGAGKTTTIKAILDMIKPDSGN
CCCCHHHHHHHHHHHCCEEEEEEEEECCHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCC
ISVLGQTTPQAREAIRDQLGIVLDGAVYPDSWPAEAVNRYVGPFFPNWDTAYFQQLLRDF
EEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHC
DIPTKPKYHDLSMGTKIKLQLAAALAHHPKLLILDEPTSGLDPIARDELIAILQDFIRDE
CCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
QHSVLMVDCKFNPNFWTNLSA
CCCEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TTDLLTVTNLTKRYADYQLANVSFSLPAGYIMGFIGPNGAGKTTTIKAILDMIKPDSGN
CCCHHHHHHHHHHHCCEEEEEEEEECCHHHEEEEECCCCCCCHHHHHHHHHHHCCCCCC
ISVLGQTTPQAREAIRDQLGIVLDGAVYPDSWPAEAVNRYVGPFFPNWDTAYFQQLLRDF
EEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHC
DIPTKPKYHDLSMGTKIKLQLAAALAHHPKLLILDEPTSGLDPIARDELIAILQDFIRDE
CCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
QHSVLMVDCKFNPNFWTNLSA
CCCEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]