| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495581
Identifier: 116495581
GI number: 116495581
Start: 2111536
End: 2111703
Strand: Direct
Name: 116495581
Synonym: LSEI_2123
Alternate gene names: NA
Gene position: 2111536-2111703 (Clockwise)
Preceding gene: 116495563
Following gene: 116495593
Centisome position: 72.93
GC content: 32.14
Gene sequence:
>168_bases ATGAATACGGTCTCAGATAATATGGTTAAGGGGTTTAAGGGTTACCGAAAAAAGCCTAACTATGCAAAAAAAAATCTCGA CTTTTTTCTGGTTTTCGTTGTCAAAAATGGCAAAATAAAAAAGCTAAAGTTGAGAATACACAATAGCTTTTTTACAAAAT CCGGTTGA
Upstream 100 bases:
>100_bases CTCAACTAAACTAGTTGAATGTTCAAAGCATATGCAGAACTGCTTTGATTGTCAAACCTTTTTTGTGTTTATTATCTTTT GAGAATATTGATGTATCAGA
Downstream 100 bases:
>100_bases ACTTACCACTCATTAGCCGATGTTTGGGACACGGCAGCACGCAAATGGTTTTCTTTTAGCCGAAGTCGGACAATGGTGCC AACTTTTTTGGGATCGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MNTVSDNMVKGFKGYRKKPNYAKKNLDFFLVFVVKNGKIKKLKLRIHNSFFTKSG
Sequences:
>Translated_55_residues MNTVSDNMVKGFKGYRKKPNYAKKNLDFFLVFVVKNGKIKKLKLRIHNSFFTKSG >Mature_55_residues MNTVSDNMVKGFKGYRKKPNYAKKNLDFFLVFVVKNGKIKKLKLRIHNSFFTKSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6427; Mature: 6427
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVSDNMVKGFKGYRKKPNYAKKNLDFFLVFVVKNGKIKKLKLRIHNSFFTKSG CCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCEECCCC >Mature Secondary Structure MNTVSDNMVKGFKGYRKKPNYAKKNLDFFLVFVVKNGKIKKLKLRIHNSFFTKSG CCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA