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The map label for this gene is 116495550

Identifier: 116495550

GI number: 116495550

Start: 2079423

End: 2080349

Strand: Direct

Name: 116495550

Synonym: LSEI_2091

Alternate gene names: NA

Gene position: 2079423-2080349 (Clockwise)

Preceding gene: 116495545

Following gene: 116495557

Centisome position: 71.82

GC content: 46.39

Gene sequence:

>927_bases
ATGAACTTACGCACACAGAAATTCCATATGTACTTCAAACAGTGGATTGAACTCTACAAGGAAGGCGCTGTTCGACCAGT
CACTTATCAGAAGTATCAAATGTCTCACAAGCATTTGGTCACGCTGGCTCCTGATCTGCATATGGACGAACTCAAGCGAC
GGACATATCAAGAATTGATCAATGAATTCGCCGCGAACCACGAAAAGCAGACGACACTCGACTTTCACCACCATCTCAAG
GCAGCGATCCTGGATGCTTTGGACGAAGGCATTTTAGAACAAGACCCTACGCGCAAAGTTGTCATCAAAGGAACCGTGTC
GCGTGTACATAAGGTTAAGTTTCTAAATCAACATGAACTCACAAAGCTGTTGGCCTTGTTGGATCTCGATCACGGATTGG
ACTGGGATTATTTCCTGCTGCTGATCGCCAAAACAGGCCTACGATTCGGTGAAGCGCTTGGCGTCACACCCATGGACTTT
GACATGGCAAAATTAACGCTGACGATCAACAAGACATGGGACTACAAAAGTGCCACTGGAAGCTTTGCAGAGACAAAGAA
TACTGCCTCTGTTCGCAAGGTGCCGCTTGATTGGCAGGTTGCGATGCAATTTGCAGCTCAAATCAAAAGTCTACCGCAGG
ACAAGCCGATCTTTGTTACAGATGGGCAACGCGTATACAATGAGACAGCAAATGATATTCTTGAGCGCAAATGTAAGCGG
GCAAGCATCCCTGTCATCAGTATTCATGGACTGCGCCACACCCACGCGTCTCTGTTACTATACGCAGGTGTCTCAGTTGG
TTCAGTTGCAAGACGACTTGGACACGCCAATATGAGCACCACCCAGAAGACATACCTGCATATCATCCAAGAATTAGAAA
ACCAAGACAACGATAAGATAATGCGCTATCTTACCTCATTGATGTAA

Upstream 100 bases:

>100_bases
TCAAAACCTTTTCGTCTGAAACAGTAAAATGACTTTCTCTAGTTCATATGGTAAACAGTTTAATTGTCTAACAAAGACAA
ATAAACCAAGGAGGTGCGCA

Downstream 100 bases:

>100_bases
CACAAAAGGATCGCCTAACGCAGCTTCACCGCGTAAGACGATCCTTTTCAAATGAAAAGGTCCTGTAATAGGGCTTTTTT
TAATAATTCAAGGCTAGAAA

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNLRTQKFHMYFKQWIELYKEGAVRPVTYQKYQMSHKHLVTLAPDLHMDELKRRTYQELINEFAANHEKQTTLDFHHHLK
AAILDALDEGILEQDPTRKVVIKGTVSRVHKVKFLNQHELTKLLALLDLDHGLDWDYFLLLIAKTGLRFGEALGVTPMDF
DMAKLTLTINKTWDYKSATGSFAETKNTASVRKVPLDWQVAMQFAAQIKSLPQDKPIFVTDGQRVYNETANDILERKCKR
ASIPVISIHGLRHTHASLLLYAGVSVGSVARRLGHANMSTTQKTYLHIIQELENQDNDKIMRYLTSLM

Sequences:

>Translated_308_residues
MNLRTQKFHMYFKQWIELYKEGAVRPVTYQKYQMSHKHLVTLAPDLHMDELKRRTYQELINEFAANHEKQTTLDFHHHLK
AAILDALDEGILEQDPTRKVVIKGTVSRVHKVKFLNQHELTKLLALLDLDHGLDWDYFLLLIAKTGLRFGEALGVTPMDF
DMAKLTLTINKTWDYKSATGSFAETKNTASVRKVPLDWQVAMQFAAQIKSLPQDKPIFVTDGQRVYNETANDILERKCKR
ASIPVISIHGLRHTHASLLLYAGVSVGSVARRLGHANMSTTQKTYLHIIQELENQDNDKIMRYLTSLM
>Mature_308_residues
MNLRTQKFHMYFKQWIELYKEGAVRPVTYQKYQMSHKHLVTLAPDLHMDELKRRTYQELINEFAANHEKQTTLDFHHHLK
AAILDALDEGILEQDPTRKVVIKGTVSRVHKVKFLNQHELTKLLALLDLDHGLDWDYFLLLIAKTGLRFGEALGVTPMDF
DMAKLTLTINKTWDYKSATGSFAETKNTASVRKVPLDWQVAMQFAAQIKSLPQDKPIFVTDGQRVYNETANDILERKCKR
ASIPVISIHGLRHTHASLLLYAGVSVGSVARRLGHANMSTTQKTYLHIIQELENQDNDKIMRYLTSLM

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 35483; Mature: 35483

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRTQKFHMYFKQWIELYKEGAVRPVTYQKYQMSHKHLVTLAPDLHMDELKRRTYQELI
CCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
NEFAANHEKQTTLDFHHHLKAAILDALDEGILEQDPTRKVVIKGTVSRVHKVKFLNQHEL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCHHHH
TKLLALLDLDHGLDWDYFLLLIAKTGLRFGEALGVTPMDFDMAKLTLTINKTWDYKSATG
HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCC
SFAETKNTASVRKVPLDWQVAMQFAAQIKSLPQDKPIFVTDGQRVYNETANDILERKCKR
CHHHCCCCCHHEECCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHH
ASIPVISIHGLRHTHASLLLYAGVSVGSVARRLGHANMSTTQKTYLHIIQELENQDNDKI
CCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH
MRYLTSLM
HHHHHHHC
>Mature Secondary Structure
MNLRTQKFHMYFKQWIELYKEGAVRPVTYQKYQMSHKHLVTLAPDLHMDELKRRTYQELI
CCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
NEFAANHEKQTTLDFHHHLKAAILDALDEGILEQDPTRKVVIKGTVSRVHKVKFLNQHEL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCHHHH
TKLLALLDLDHGLDWDYFLLLIAKTGLRFGEALGVTPMDFDMAKLTLTINKTWDYKSATG
HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCC
SFAETKNTASVRKVPLDWQVAMQFAAQIKSLPQDKPIFVTDGQRVYNETANDILERKCKR
CHHHCCCCCHHEECCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHH
ASIPVISIHGLRHTHASLLLYAGVSVGSVARRLGHANMSTTQKTYLHIIQELENQDNDKI
CCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH
MRYLTSLM
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]