Click here to switch to the map view.

The map label for this gene is 116495469

Identifier: 116495469

GI number: 116495469

Start: 1980699

End: 1982225

Strand: Direct

Name: 116495469

Synonym: LSEI_2004

Alternate gene names: NA

Gene position: 1980699-1982225 (Clockwise)

Preceding gene: 116495468

Following gene: 116495471

Centisome position: 68.41

GC content: 37.26

Gene sequence:

>1527_bases
ATGAGTGACCTACAAGACTTTAAAGCTTTTTTTCGGAAACGTCTGTCGGTAATTACTTTTATTATGCTAACCACGCTTCT
TCTGTATTTACCAAAATTGGCAAATTTCAGTTATTCAATCGATTCCGAACGGATGATAAATAATCCGGCAGAAGTTTTAA
AATCATGGATAGGTATTGGACGTTTTGGTCTGGTCTTTTTAAAGCGATTCTTTCTGTTTGGCATCAATATAAACCCGTTC
TTCATAAATGCAACCACATATCTGTTGCTAGGAACAAGTGCAATCCTCTTATTCTATATTCTTGATAAAAGCACCAATTT
ATCTGTGTCTTTTAAGATAATCGCTATTTTAATGTACGTATGCTCGCCTATCCATTTTGAGCAAACAAATTTCATACTAC
AGAGTACTGAAGTATTGATAGGGTACAATTTATTGTTCACGTCATTTGTTGTTTTGGGATTACCTGGTCATCAAACAAAT
TGGTATCGCCTACTTATCGGCGTCACACTCACAACATTTAGTTTTTCAATTTATCCATCACTGATCATTGCGGCCGCGAC
TGTGTGCACTATCGTTTTTCATGTTTCACATATGCAGCGGAGCCATAATCCTGAGAGTTTAGTTGCTTGGTTAAAACCTT
TCAGACAAATGATTTACATGTTCGTCATTAGTCTTGTAAGTTATTTTCTTCTCAATAAATTTGTACTTTTTTTGACACAC
ATCGCCAAAGATCCATACACTTCTAATGCATCCATCTGGGGGAAAGTCCACTCAACAGATGTCATTACCAGCATCAAAAC
TGCATTTTACGAACAGTTCATCGTTGGAACTAAACCGTTCATCTTCTCTATTACAACATTTTTAGGTTTCGCAGCCGTCT
TGGTGCTACTTTTATCAATTATGAAATCAAAATTCATCAATTGGCCAGTTTTTCTCAGTCTCTTCCTGGAATATCTTTTG
GCGCTCAGTCCTCTGATCTTATTGGGCGCATCAATTGGACCCATTAGAGCTTTGACACCGACAATCCCGCTTGTATTAAT
GATTTATGTCTTCACAATCTTCTATTATCTTAACTTTACTTCGCTTAGAGTAGTAGCTGCTGTGCTCATGTCGCTGCTCC
TCTTTTCGCAAACAAAAACAACATCAGATCTAGAACAAACTGATATCTTAACGTTCCAATCTGAGACAATTCTTTCCAAC
CAAATAATGCATAAAATCAACGAGCTCAATATTACACAATATCACGAATATCGGTTGATCGTTGTTGGCAGCAAATCGTT
TGAATCGCCGTTAACGCAGCATGGGGAAGTAGTTGGCCACACACATTTTGACTGGGACAACGGCACTAGAGTTGGCAGTA
ACCAGAGAATTCACGATTTTTTTCAGTCAAAAGGCTACGCATTTAAAGAAGTTCATCCTAACGACTATGCCAATGCAGTC
CAACTTACGCAAGATTTCAATATGAAGTCTTTTCCAAGTACAGACGGATTAAAAATTTTTGATCATACAATTGTTGTAAA
ACTGTAG

Upstream 100 bases:

>100_bases
CAAATTGAGAAAACGAACAACTAAATAAGATAAAGGTTTCATTCCAAGTTGTTTAGTTTTTTGCTACTTACGTAAAGTAC
TTTGAGGGGAGAAAAAGTAA

Downstream 100 bases:

>100_bases
TGAAGCACTAATATTCAGTACCTACCAGTGGTATTAAGCATCACATAAAAAGGATCTAGTGTAAATGGCGGTCATAAAAT
GTAGGAAAGGGCGTGCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MSDLQDFKAFFRKRLSVITFIMLTTLLLYLPKLANFSYSIDSERMINNPAEVLKSWIGIGRFGLVFLKRFFLFGININPF
FINATTYLLLGTSAILLFYILDKSTNLSVSFKIIAILMYVCSPIHFEQTNFILQSTEVLIGYNLLFTSFVVLGLPGHQTN
WYRLLIGVTLTTFSFSIYPSLIIAAATVCTIVFHVSHMQRSHNPESLVAWLKPFRQMIYMFVISLVSYFLLNKFVLFLTH
IAKDPYTSNASIWGKVHSTDVITSIKTAFYEQFIVGTKPFIFSITTFLGFAAVLVLLLSIMKSKFINWPVFLSLFLEYLL
ALSPLILLGASIGPIRALTPTIPLVLMIYVFTIFYYLNFTSLRVVAAVLMSLLLFSQTKTTSDLEQTDILTFQSETILSN
QIMHKINELNITQYHEYRLIVVGSKSFESPLTQHGEVVGHTHFDWDNGTRVGSNQRIHDFFQSKGYAFKEVHPNDYANAV
QLTQDFNMKSFPSTDGLKIFDHTIVVKL

Sequences:

>Translated_508_residues
MSDLQDFKAFFRKRLSVITFIMLTTLLLYLPKLANFSYSIDSERMINNPAEVLKSWIGIGRFGLVFLKRFFLFGININPF
FINATTYLLLGTSAILLFYILDKSTNLSVSFKIIAILMYVCSPIHFEQTNFILQSTEVLIGYNLLFTSFVVLGLPGHQTN
WYRLLIGVTLTTFSFSIYPSLIIAAATVCTIVFHVSHMQRSHNPESLVAWLKPFRQMIYMFVISLVSYFLLNKFVLFLTH
IAKDPYTSNASIWGKVHSTDVITSIKTAFYEQFIVGTKPFIFSITTFLGFAAVLVLLLSIMKSKFINWPVFLSLFLEYLL
ALSPLILLGASIGPIRALTPTIPLVLMIYVFTIFYYLNFTSLRVVAAVLMSLLLFSQTKTTSDLEQTDILTFQSETILSN
QIMHKINELNITQYHEYRLIVVGSKSFESPLTQHGEVVGHTHFDWDNGTRVGSNQRIHDFFQSKGYAFKEVHPNDYANAV
QLTQDFNMKSFPSTDGLKIFDHTIVVKL
>Mature_507_residues
SDLQDFKAFFRKRLSVITFIMLTTLLLYLPKLANFSYSIDSERMINNPAEVLKSWIGIGRFGLVFLKRFFLFGININPFF
INATTYLLLGTSAILLFYILDKSTNLSVSFKIIAILMYVCSPIHFEQTNFILQSTEVLIGYNLLFTSFVVLGLPGHQTNW
YRLLIGVTLTTFSFSIYPSLIIAAATVCTIVFHVSHMQRSHNPESLVAWLKPFRQMIYMFVISLVSYFLLNKFVLFLTHI
AKDPYTSNASIWGKVHSTDVITSIKTAFYEQFIVGTKPFIFSITTFLGFAAVLVLLLSIMKSKFINWPVFLSLFLEYLLA
LSPLILLGASIGPIRALTPTIPLVLMIYVFTIFYYLNFTSLRVVAAVLMSLLLFSQTKTTSDLEQTDILTFQSETILSNQ
IMHKINELNITQYHEYRLIVVGSKSFESPLTQHGEVVGHTHFDWDNGTRVGSNQRIHDFFQSKGYAFKEVHPNDYANAVQ
LTQDFNMKSFPSTDGLKIFDHTIVVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57983; Mature: 57852

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
SDLQDFKAFFRKRLSVITFIMLTTLLLYLPKLANFSYSIDSERMINNPAEVLKSWIGIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHCCC
RFGLVFLKRFFLFGININPFFINATTYLLLGTSAILLFYILDKSTNLSVSFKIIAILMYV
HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
CSPIHFEQTNFILQSTEVLIGYNLLFTSFVVLGLPGHQTNWYRLLIGVTLTTFSFSIYPS
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHH
LIIAAATVCTIVFHVSHMQRSHNPESLVAWLKPFRQMIYMFVISLVSYFLLNKFVLFLTH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAKDPYTSNASIWGKVHSTDVITSIKTAFYEQFIVGTKPFIFSITTFLGFAAVLVLLLSI
HHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MKSKFINWPVFLSLFLEYLLALSPLILLGASIGPIRALTPTIPLVLMIYVFTIFYYLNFT
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHH
SLRVVAAVLMSLLLFSQTKTTSDLEQTDILTFQSETILSNQIMHKINELNITQYHEYRLI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEECHHHHHHHHHHHHHHHCCCEEEEEEEEE
VVGSKSFESPLTQHGEVVGHTHFDWDNGTRVGSNQRIHDFFQSKGYAFKEVHPNDYANAV
EEECCCCCCHHHHCCCEEECEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHH
QLTQDFNMKSFPSTDGLKIFDHTIVVKL
HHHHCCCCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA