Click here to switch to the map view.

The map label for this gene is 116495443

Identifier: 116495443

GI number: 116495443

Start: 1948695

End: 1949351

Strand: Direct

Name: 116495443

Synonym: LSEI_1977

Alternate gene names: NA

Gene position: 1948695-1949351 (Clockwise)

Preceding gene: 116495442

Following gene: 116495444

Centisome position: 67.31

GC content: 32.57

Gene sequence:

>657_bases
ATGGAATTCAAACATAGCATTGAAGTTGATATAACTCGTTCAGTTGACTTAGTTCTTGATAGAATTAGTGATAAGAACTC
TGCAAAGCCATTTCTCACACTTTGTCACAGTAACATTATTGCAAATATAATATTTATTAAATATATTTGGTATTCGCGGG
AAAAATATAAGTTTGCAGATAATTTGATTTCTGATCTACTCAATGCTTACTGTGCTCTTGCTAACGCAGACTCAAGAATT
TTCTACTTTTATCTACGTTCATCCATTGAGAACTTCTATAAATCATCCACCATTGCTGACGATTCTACTCAGATCAGTTA
CTACAAAGCAGAAAAAAATTTCGGACAGTTAACTGGTAGTTCATTTAACTTTATTTGGCAGTTCAAGTTTATAAAATTTC
AGTATAGTCAATTTAGCGACTCGGTTCATTCAAACCCCAAAACTAATCGATCGAAAACGGACGAATACATTGAGGACTCT
TTAAACAAGAATGACTTTTCTTCTCCTGCAATATTAATGTCTTCATCGTATGATTTAATGAACTTACTTCATGTGTATGC
CGATTTTTACCTAAGAATGCCAAATTTCGAACCACGTGAAGATTCCTTTTATCGACATAAGGATTGGCTAAACTATTTTT
TGGAATTGCTTAATTGA

Upstream 100 bases:

>100_bases
CTTTCGGAAAAACAAGAGTATGCGATCCCACGGACTTCAGCAAAAAAGAAATCAAATTCCAATGACAAACTAAGCAAGTG
GTTGCAAGGACTTTAAAACG

Downstream 100 bases:

>100_bases
TTCTTACCTTTTTCCAATAGAACAAATTCTTTAGTCCCAATTATGGGGCTTTTATTTTAATGGCAAAACGAACATACGTT
TGAATTTATGTACAAATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MEFKHSIEVDITRSVDLVLDRISDKNSAKPFLTLCHSNIIANIIFIKYIWYSREKYKFADNLISDLLNAYCALANADSRI
FYFYLRSSIENFYKSSTIADDSTQISYYKAEKNFGQLTGSSFNFIWQFKFIKFQYSQFSDSVHSNPKTNRSKTDEYIEDS
LNKNDFSSPAILMSSSYDLMNLLHVYADFYLRMPNFEPREDSFYRHKDWLNYFLELLN

Sequences:

>Translated_218_residues
MEFKHSIEVDITRSVDLVLDRISDKNSAKPFLTLCHSNIIANIIFIKYIWYSREKYKFADNLISDLLNAYCALANADSRI
FYFYLRSSIENFYKSSTIADDSTQISYYKAEKNFGQLTGSSFNFIWQFKFIKFQYSQFSDSVHSNPKTNRSKTDEYIEDS
LNKNDFSSPAILMSSSYDLMNLLHVYADFYLRMPNFEPREDSFYRHKDWLNYFLELLN
>Mature_218_residues
MEFKHSIEVDITRSVDLVLDRISDKNSAKPFLTLCHSNIIANIIFIKYIWYSREKYKFADNLISDLLNAYCALANADSRI
FYFYLRSSIENFYKSSTIADDSTQISYYKAEKNFGQLTGSSFNFIWQFKFIKFQYSQFSDSVHSNPKTNRSKTDEYIEDS
LNKNDFSSPAILMSSSYDLMNLLHVYADFYLRMPNFEPREDSFYRHKDWLNYFLELLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25880; Mature: 25880

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKHSIEVDITRSVDLVLDRISDKNSAKPFLTLCHSNIIANIIFIKYIWYSREKYKFAD
CCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NLISDLLNAYCALANADSRIFYFYLRSSIENFYKSSTIADDSTQISYYKAEKNFGQLTGS
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCC
SFNFIWQFKFIKFQYSQFSDSVHSNPKTNRSKTDEYIEDSLNKNDFSSPAILMSSSYDLM
CCEEEEEEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHH
NLLHVYADFYLRMPNFEPREDSFYRHKDWLNYFLELLN
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEFKHSIEVDITRSVDLVLDRISDKNSAKPFLTLCHSNIIANIIFIKYIWYSREKYKFAD
CCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NLISDLLNAYCALANADSRIFYFYLRSSIENFYKSSTIADDSTQISYYKAEKNFGQLTGS
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCC
SFNFIWQFKFIKFQYSQFSDSVHSNPKTNRSKTDEYIEDSLNKNDFSSPAILMSSSYDLM
CCEEEEEEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHH
NLLHVYADFYLRMPNFEPREDSFYRHKDWLNYFLELLN
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA