Click here to switch to the map view.

The map label for this gene is 116495431

Identifier: 116495431

GI number: 116495431

Start: 1942316

End: 1942804

Strand: Direct

Name: 116495431

Synonym: LSEI_1965

Alternate gene names: NA

Gene position: 1942316-1942804 (Clockwise)

Preceding gene: 116495407

Following gene: 116495434

Centisome position: 67.09

GC content: 42.54

Gene sequence:

>489_bases
ATGAAACTGTCAATTCTTGGTATGCAGACTCTTGAGTATGCATTGAAGACTAGCTTCGAGAATCCAGTACGCCCATGGTA
CAAGTCGAATGACGGACTGTTTGCGCCCGCTTTCTTTAGACAAGGACCAACAGGTGATCTAATTGCATGGACCGCATCGA
GAAAAGGATTTCCTGCATCGCAGCGTCAATTTACAGAAAGATTTTCACCCGTAATTTTTGACTGGTTTGTCCATGATTTC
TACGATCCAGATGACCCAAGCAAATCATTACCAGACGATAGTCAAACTCTTTTAAAGGTAGTAAAGACCAGTCTTTTACC
AAGCTTGGAATCGGCCGAAGCTTCTTTAGTGCAGACTTCAGTTGGGCAGACTTACCAATACCCAATCTCGTATCTAACGA
TGTCCATCAAATACGAGAACGGATTGCTTCTTGAAGCTGTTGAACTGACTAATGATGAATATGAGCTTGTGGGATTTGAA
CGAAGTTAG

Upstream 100 bases:

>100_bases
GCTCTCGATCCATGTGGCTCACCTCCTTAACTTGAAAACTGAATATTGTGTGATTGCCTCCCGCCGAGTGCGATAATTGC
TTTGAAGGGAGGTGATATAT

Downstream 100 bases:

>100_bases
ATTCATATTTCAGTTGGTTATAGGCATCTTGAAGGCTTGCGTATGCTTCCTCATACGTCATGCCTTCTTTTTTAATCAGA
TTCACAATTTTCACTGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKLSILGMQTLEYALKTSFENPVRPWYKSNDGLFAPAFFRQGPTGDLIAWTASRKGFPASQRQFTERFSPVIFDWFVHDF
YDPDDPSKSLPDDSQTLLKVVKTSLLPSLESAEASLVQTSVGQTYQYPISYLTMSIKYENGLLLEAVELTNDEYELVGFE
RS

Sequences:

>Translated_162_residues
MKLSILGMQTLEYALKTSFENPVRPWYKSNDGLFAPAFFRQGPTGDLIAWTASRKGFPASQRQFTERFSPVIFDWFVHDF
YDPDDPSKSLPDDSQTLLKVVKTSLLPSLESAEASLVQTSVGQTYQYPISYLTMSIKYENGLLLEAVELTNDEYELVGFE
RS
>Mature_162_residues
MKLSILGMQTLEYALKTSFENPVRPWYKSNDGLFAPAFFRQGPTGDLIAWTASRKGFPASQRQFTERFSPVIFDWFVHDF
YDPDDPSKSLPDDSQTLLKVVKTSLLPSLESAEASLVQTSVGQTYQYPISYLTMSIKYENGLLLEAVELTNDEYELVGFE
RS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18412; Mature: 18412

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSILGMQTLEYALKTSFENPVRPWYKSNDGLFAPAFFRQGPTGDLIAWTASRKGFPAS
CEEEEHHHHHHHHHHHHCCCCCCCCCEECCCCEECHHHHCCCCCCCEEEEECCCCCCCHH
QRQFTERFSPVIFDWFVHDFYDPDDPSKSLPDDSQTLLKVVKTSLLPSLESAEASLVQTS
HHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VGQTYQYPISYLTMSIKYENGLLLEAVELTNDEYELVGFERS
CCCCEECCEEEEEEEEEECCCEEEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MKLSILGMQTLEYALKTSFENPVRPWYKSNDGLFAPAFFRQGPTGDLIAWTASRKGFPAS
CEEEEHHHHHHHHHHHHCCCCCCCCCEECCCCEECHHHHCCCCCCCEEEEECCCCCCCHH
QRQFTERFSPVIFDWFVHDFYDPDDPSKSLPDDSQTLLKVVKTSLLPSLESAEASLVQTS
HHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VGQTYQYPISYLTMSIKYENGLLLEAVELTNDEYELVGFERS
CCCCEECCEEEEEEEEEECCCEEEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA