Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116495371

Identifier: 116495371

GI number: 116495371

Start: 1900139

End: 1901734

Strand: Direct

Name: 116495371

Synonym: LSEI_1905

Alternate gene names: NA

Gene position: 1900139-1901734 (Clockwise)

Preceding gene: 116495369

Following gene: 116495372

Centisome position: 65.63

GC content: 52.19

Gene sequence:

>1596_bases
ATGTCTAGTTCCTCGCATCTGCCACTCACAAGTACCCTCATAATTGTAGCTGCCCTTGCCGGTGGTGGTATTGCCACCAG
TACGCTGGTCACGTTGCCGGCTACCGTCAACGCAGCCAGTGACGCTGACGCAACGCAGGTTTACACTGACTTTTCAACTT
TTAAGCCAATCGCCGGACCCATCACGGTGGTCACCCCCGGCGCAACGCCAACGGCTCCGCCAGAAAAAATCAGCGCCAAT
GGCCATGATTATTTTTATAATTATACGTCCGGAAAACGGTTGCTCTACTTACCGATTGCGCAAGCCTATCAGCCAAACTT
AGCGCACATCAAATCACTCGTTGACGCCGCCCTCCAACAAAAAGGTAGTCAGCATGATGATACAGTCGCTCGAATTGCCG
CATCTGATCTTGCCAAGGCCATCCAAGCCGACTCAGTGCTCCGGCCCGATAACACTGCGAATAACAAAGCTTTCACGGAC
GCCGGATTAGTAGCTAAGGGCGGTTCGGTCGAAACCTTTAATGCCGACCCCAGTGCCGTGAAGTGGACAGACGAAGTGGT
GGCGAATCGCATCACCGCCTCATTCCCTAAAGGTGCCACCAGTTACGGTCTCGCAATTGGTCGGCTGCCAAGTGGCGAAT
TTGTCGCCTACATCAACTACGCAGCAAAACCTCCCGTCTCGAGTCAGGACACCTACACCGTTTCCTACAAAACCCTCGAT
GGCAAGTCGCTCAAGCCAGACGATCAAGTAGCCAGTGACAAAATCGCCGTCCTGCCATTCCCAGACTTTTCATACATCTA
CTGGAAAAAAGACGATGCTGCCCACACTGTCACCATGTACTATCAACCTGCCGATGGCGCCTATCAACCTGAGATGAGCG
ATGTCACCGACACATTCTACCGGCTACTAAACAAGGAGCGAGCCAACAAAGGTTTAGCCCCACTCAATCTAGACCCGCAG
CTCCAAAACGCCGCGCAACAAACGGCCAGTGCCAACGCTAATCAGCTGGCCTACCCTCAGAATCCACGAACCGTCACGCC
AGCAGATCCGTCATCCCCTGATACAAACCTCATCACATTATCGAGTGACACCATTCCATTCGAACACGACGAAGGCGAAG
GTGCAGAAGATTTAGTCGCAACCGGCATCCTGCAACTCGATGATCGTCCGGGCACACTCAACCTCGGCGACCTTTATCAA
CCAGATGTAACCGCAGTCGGTTTTGGCGCGACGATGGGCCAAGACGGGCACATGTACTACTCCATTCGACTCTCGGAGAA
GAAAAACGCGTCAACGAATGAAAATTCAGCTGATGATCCCTCACAGTCAGCTTCTGATCCTGCCACAAAGAACGATCAGG
CAGGTGTTCCTCCAACGGCTGACAAACAAGCGAATGCTCCGAGCTCACCAACACCCCAAAAGACGAATGCGACTCCTTCA
GCTGATAACGCCAAACATGAAGAGCAGAAAGCTTCCAAAGATTTACCTGAGACTGGTAATCGCGTTTTCGAAAAAGGCGG
CATTGTAGGCTTCCTAATGTTGTTAGCGACATTGGGGCTTGGGATGGTTCAGAAGATGCGATCGAAGCGGTTTTAA

Upstream 100 bases:

>100_bases
GATCTTATACCGCAATTGTGTTAACTAGGACGGTCAGCGTACACTTTTGTATGTTAATCGTAATGATTACGCTTTTCAAC
TTCGAAAGGGTGTGTTTTTT

Downstream 100 bases:

>100_bases
TTCTGGCAATCTTTGAGAGAGAATCCTTCTGATCCTTTTATTAACCCCTTCACCAAAAACAACGTTGGGAATGTACCCCA
GCGTTGTTTTTGGTGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MSSSSHLPLTSTLIIVAALAGGGIATSTLVTLPATVNAASDADATQVYTDFSTFKPIAGPITVVTPGATPTAPPEKISAN
GHDYFYNYTSGKRLLYLPIAQAYQPNLAHIKSLVDAALQQKGSQHDDTVARIAASDLAKAIQADSVLRPDNTANNKAFTD
AGLVAKGGSVETFNADPSAVKWTDEVVANRITASFPKGATSYGLAIGRLPSGEFVAYINYAAKPPVSSQDTYTVSYKTLD
GKSLKPDDQVASDKIAVLPFPDFSYIYWKKDDAAHTVTMYYQPADGAYQPEMSDVTDTFYRLLNKERANKGLAPLNLDPQ
LQNAAQQTASANANQLAYPQNPRTVTPADPSSPDTNLITLSSDTIPFEHDEGEGAEDLVATGILQLDDRPGTLNLGDLYQ
PDVTAVGFGATMGQDGHMYYSIRLSEKKNASTNENSADDPSQSASDPATKNDQAGVPPTADKQANAPSSPTPQKTNATPS
ADNAKHEEQKASKDLPETGNRVFEKGGIVGFLMLLATLGLGMVQKMRSKRF

Sequences:

>Translated_531_residues
MSSSSHLPLTSTLIIVAALAGGGIATSTLVTLPATVNAASDADATQVYTDFSTFKPIAGPITVVTPGATPTAPPEKISAN
GHDYFYNYTSGKRLLYLPIAQAYQPNLAHIKSLVDAALQQKGSQHDDTVARIAASDLAKAIQADSVLRPDNTANNKAFTD
AGLVAKGGSVETFNADPSAVKWTDEVVANRITASFPKGATSYGLAIGRLPSGEFVAYINYAAKPPVSSQDTYTVSYKTLD
GKSLKPDDQVASDKIAVLPFPDFSYIYWKKDDAAHTVTMYYQPADGAYQPEMSDVTDTFYRLLNKERANKGLAPLNLDPQ
LQNAAQQTASANANQLAYPQNPRTVTPADPSSPDTNLITLSSDTIPFEHDEGEGAEDLVATGILQLDDRPGTLNLGDLYQ
PDVTAVGFGATMGQDGHMYYSIRLSEKKNASTNENSADDPSQSASDPATKNDQAGVPPTADKQANAPSSPTPQKTNATPS
ADNAKHEEQKASKDLPETGNRVFEKGGIVGFLMLLATLGLGMVQKMRSKRF
>Mature_530_residues
SSSSHLPLTSTLIIVAALAGGGIATSTLVTLPATVNAASDADATQVYTDFSTFKPIAGPITVVTPGATPTAPPEKISANG
HDYFYNYTSGKRLLYLPIAQAYQPNLAHIKSLVDAALQQKGSQHDDTVARIAASDLAKAIQADSVLRPDNTANNKAFTDA
GLVAKGGSVETFNADPSAVKWTDEVVANRITASFPKGATSYGLAIGRLPSGEFVAYINYAAKPPVSSQDTYTVSYKTLDG
KSLKPDDQVASDKIAVLPFPDFSYIYWKKDDAAHTVTMYYQPADGAYQPEMSDVTDTFYRLLNKERANKGLAPLNLDPQL
QNAAQQTASANANQLAYPQNPRTVTPADPSSPDTNLITLSSDTIPFEHDEGEGAEDLVATGILQLDDRPGTLNLGDLYQP
DVTAVGFGATMGQDGHMYYSIRLSEKKNASTNENSADDPSQSASDPATKNDQAGVPPTADKQANAPSSPTPQKTNATPSA
DNAKHEEQKASKDLPETGNRVFEKGGIVGFLMLLATLGLGMVQKMRSKRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56374; Mature: 56243

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSHLPLTSTLIIVAALAGGGIATSTLVTLPATVNAASDADATQVYTDFSTFKPIAGP
CCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHEEECHHHCCCCCCC
ITVVTPGATPTAPPEKISANGHDYFYNYTSGKRLLYLPIAQAYQPNLAHIKSLVDAALQQ
EEEEECCCCCCCCCHHCCCCCCEEEEEECCCCEEEEEECHHHCCCCHHHHHHHHHHHHHH
KGSQHDDTVARIAASDLAKAIQADSVLRPDNTANNKAFTDAGLVAKGGSVETFNADPSAV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEECCCCEEEECCCCCCE
KWTDEVVANRITASFPKGATSYGLAIGRLPSGEFVAYINYAAKPPVSSQDTYTVSYKTLD
EEHHHHHHHHHHHCCCCCCHHHCEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEECC
GKSLKPDDQVASDKIAVLPFPDFSYIYWKKDDAAHTVTMYYQPADGAYQPEMSDVTDTFY
CCCCCCCHHHCCCCEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHH
RLLNKERANKGLAPLNLDPQLQNAAQQTASANANQLAYPQNPRTVTPADPSSPDTNLITL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEEE
SSDTIPFEHDEGEGAEDLVATGILQLDDRPGTLNLGDLYQPDVTAVGFGATMGQDGHMYY
ECCCCCCCCCCCCCHHHHHHHCEEEECCCCCEECCCCCCCCCCEEEECCCCCCCCCCEEE
SIRLSEKKNASTNENSADDPSQSASDPATKNDQAGVPPTADKQANAPSSPTPQKTNATPS
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADNAKHEEQKASKDLPETGNRVFEKGGIVGFLMLLATLGLGMVQKMRSKRF
CCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSSSHLPLTSTLIIVAALAGGGIATSTLVTLPATVNAASDADATQVYTDFSTFKPIAGP
CCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHEEECHHHCCCCCCC
ITVVTPGATPTAPPEKISANGHDYFYNYTSGKRLLYLPIAQAYQPNLAHIKSLVDAALQQ
EEEEECCCCCCCCCHHCCCCCCEEEEEECCCCEEEEEECHHHCCCCHHHHHHHHHHHHHH
KGSQHDDTVARIAASDLAKAIQADSVLRPDNTANNKAFTDAGLVAKGGSVETFNADPSAV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEECCCCEEEECCCCCCE
KWTDEVVANRITASFPKGATSYGLAIGRLPSGEFVAYINYAAKPPVSSQDTYTVSYKTLD
EEHHHHHHHHHHHCCCCCCHHHCEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEECC
GKSLKPDDQVASDKIAVLPFPDFSYIYWKKDDAAHTVTMYYQPADGAYQPEMSDVTDTFY
CCCCCCCHHHCCCCEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHH
RLLNKERANKGLAPLNLDPQLQNAAQQTASANANQLAYPQNPRTVTPADPSSPDTNLITL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEEE
SSDTIPFEHDEGEGAEDLVATGILQLDDRPGTLNLGDLYQPDVTAVGFGATMGQDGHMYY
ECCCCCCCCCCCCCHHHHHHHCEEEECCCCCEECCCCCCCCCCEEEECCCCCCCCCCEEE
SIRLSEKKNASTNENSADDPSQSASDPATKNDQAGVPPTADKQANAPSSPTPQKTNATPS
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADNAKHEEQKASKDLPETGNRVFEKGGIVGFLMLLATLGLGMVQKMRSKRF
CCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA