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The map label for this gene is 116495342

Identifier: 116495342

GI number: 116495342

Start: 1869539

End: 1870177

Strand: Direct

Name: 116495342

Synonym: LSEI_1875

Alternate gene names: NA

Gene position: 1869539-1870177 (Clockwise)

Preceding gene: 116495341

Following gene: 116495344

Centisome position: 64.57

GC content: 46.95

Gene sequence:

>639_bases
ATGAAAAATGTTGTGACAGATCCCGAAAAAGTCACCCGTATACTCAAAACAGCGACGGAAATTTTCGGCCAGCAAGGCTT
CATCAAGAGCAAAACCGATCAGATTGCCAACCAAGCACAAGTATCTAAGGGCTTGCTCTTCCATTATTTTGGCAATAAAC
AAGCGCTGTATCTTGACGCTTTCAAATATGCCTATCATCGGATTTATGATCACATGGACCCCAAAAAGTGGCAGAATGCC
CCTGGCTTGGCTGCCATGATGACCACTGCAGTTAAGTATGAGTTGAAACTGCAATTCAAATTCCCGGCTGAATACCGCTT
GATGATGCAAGCCTATGCTGATTTACCGCATTTTCCCGAACCGTTGCGACAACAAGTGCAGCAAGAAACAACTGCCATAT
CCGCTGAAGCCGATCGCATTTTCCGCGAGAAAATTGAACAGCTGCCTCGTCGTGAGGGCCTGTCAGTCGATGACGTTTTC
GGTGTCGTTTCTGCCTTAATCGCCCAACAAACAGCGGTCACCACCAGACTCATTGCCAGTGGCCATTATCGCAAGTTTGA
AGATCTGCAGTCCGTGGTTGAGACGATGGCACGCCAGTTATTGATTGTCGAACACGGCTTTTTACCAGATGAAAGTTGA

Upstream 100 bases:

>100_bases
TTGAAAACGTTGATCAAACATGGCTAATCGTGATGGTTGTTAGCGCTATAGTATTATTTATTCTTGGTATTGCCGGTTAT
CGTCGTCAGGATCTGAGCTT

Downstream 100 bases:

>100_bases
CGTCAGCTGATAGATTAAAAAAACCGCCTGCACTGATCTGATTCAGTACAGGCGGTTTTTTAGATCATAAACCAGAAATG
CCTTACCTTATTCAACCTTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKNVVTDPEKVTRILKTATEIFGQQGFIKSKTDQIANQAQVSKGLLFHYFGNKQALYLDAFKYAYHRIYDHMDPKKWQNA
PGLAAMMTTAVKYELKLQFKFPAEYRLMMQAYADLPHFPEPLRQQVQQETTAISAEADRIFREKIEQLPRREGLSVDDVF
GVVSALIAQQTAVTTRLIASGHYRKFEDLQSVVETMARQLLIVEHGFLPDES

Sequences:

>Translated_212_residues
MKNVVTDPEKVTRILKTATEIFGQQGFIKSKTDQIANQAQVSKGLLFHYFGNKQALYLDAFKYAYHRIYDHMDPKKWQNA
PGLAAMMTTAVKYELKLQFKFPAEYRLMMQAYADLPHFPEPLRQQVQQETTAISAEADRIFREKIEQLPRREGLSVDDVF
GVVSALIAQQTAVTTRLIASGHYRKFEDLQSVVETMARQLLIVEHGFLPDES
>Mature_212_residues
MKNVVTDPEKVTRILKTATEIFGQQGFIKSKTDQIANQAQVSKGLLFHYFGNKQALYLDAFKYAYHRIYDHMDPKKWQNA
PGLAAMMTTAVKYELKLQFKFPAEYRLMMQAYADLPHFPEPLRQQVQQETTAISAEADRIFREKIEQLPRREGLSVDDVF
GVVSALIAQQTAVTTRLIASGHYRKFEDLQSVVETMARQLLIVEHGFLPDES

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24331; Mature: 24331

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVVTDPEKVTRILKTATEIFGQQGFIKSKTDQIANQAQVSKGLLFHYFGNKQALYLDA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEHHHH
FKYAYHRIYDHMDPKKWQNAPGLAAMMTTAVKYELKLQFKFPAEYRLMMQAYADLPHFPE
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHCCCCCCH
PLRQQVQQETTAISAEADRIFREKIEQLPRREGLSVDDVFGVVSALIAQQTAVTTRLIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GHYRKFEDLQSVVETMARQLLIVEHGFLPDES
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKNVVTDPEKVTRILKTATEIFGQQGFIKSKTDQIANQAQVSKGLLFHYFGNKQALYLDA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEHHHH
FKYAYHRIYDHMDPKKWQNAPGLAAMMTTAVKYELKLQFKFPAEYRLMMQAYADLPHFPE
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHCCCCCCH
PLRQQVQQETTAISAEADRIFREKIEQLPRREGLSVDDVFGVVSALIAQQTAVTTRLIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GHYRKFEDLQSVVETMARQLLIVEHGFLPDES
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA