| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495338
Identifier: 116495338
GI number: 116495338
Start: 1864692
End: 1865549
Strand: Direct
Name: 116495338
Synonym: LSEI_1871
Alternate gene names: NA
Gene position: 1864692-1865549 (Clockwise)
Preceding gene: 116495337
Following gene: 116495339
Centisome position: 64.4
GC content: 42.07
Gene sequence:
>858_bases ATGAAACAACGGAAGCAGGAAACACAGCGATTAATTGATGAAAATGACCAATTGCGAAAACAGCTTAATGTGGAAAGTCG CCATTATTATGAAGACTTAATCGTCTATATGCGTGCTCATACGCTGTTTCGCGATGATCATATTGTTGAAGAAAACTTAA TGGCCATTCTTCAAGACTTGATTGATGCACAACAGAATGGCATGGATGCTGAAACGTATTTTGGGAAAGATCCCGCGCAA ACGGGGACAGAGATGCTGAAAGCAATTCCCATAAATATTGTTGACTTTGTTTGGTTTAATTTGAAGTTAATGATGATGTT AATCCTTCTCACGCTGCTGCCTAGCCTGACGACTTCCGAGGTAAAGCTTGATGGTGGTAATCTTCTATTTGTGAGCATCA TCATTTTGATAGCGACATGGAGCCTTCTCTGGATAGTCGGCAGTAACGCATTCACCACACCATCACGCACTCAAAAAGTA GGCTTTTTCATTGGTGGTGGTGCCATTTTTGCTGGCACAGTGGGATTGCTTTTCTTTTTTAAAACAAGTTGGCAACTCAC AATTTCACCGCAAATTTCGTTCATTCTAATTGTCAGTGGCTTGATTGTTGGTGCGTTGCTACCGTTCTTCTCTCGCCCCA CTGGAATCAAGTTGTTCCTCTACTTTTATTCGATGGGTTATTTACTACTGGGTCTGCTCGTCCATTTACCATTCACCCGC AAAATTATGACGGCAAAAATTCATTTAGGTGCTTGGCAGTGGTTGCTCTGGGTTGGTCTGGCAATTTTTGCAATTTTGAT AGGACTAGTTTCTTGGTGGTTCATTCGCCGAGAGCGTAGGCATGACCCAGATAGATAA
Upstream 100 bases:
>100_bases CCGTCACAGCAGAGGGTATGGCTGCGCGTCAAACTTTTCAACAGCAGTGGTCACAACTGAAGGACCATGTCGATCAGCTC ATCAACGAGGAGGACAAGCC
Downstream 100 bases:
>100_bases GATGCCGTGATTAATTTCGTGACGAGGCAAGTTGCCTCGTTTTTTAATGTAAAATAGCCTTAATCCCAATCAACCCAAAG GAGTGACCCCCACTTGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKQRKQETQRLIDENDQLRKQLNVESRHYYEDLIVYMRAHTLFRDDHIVEENLMAILQDLIDAQQNGMDAETYFGKDPAQ TGTEMLKAIPINIVDFVWFNLKLMMMLILLTLLPSLTTSEVKLDGGNLLFVSIIILIATWSLLWIVGSNAFTTPSRTQKV GFFIGGGAIFAGTVGLLFFFKTSWQLTISPQISFILIVSGLIVGALLPFFSRPTGIKLFLYFYSMGYLLLGLLVHLPFTR KIMTAKIHLGAWQWLLWVGLAIFAILIGLVSWWFIRRERRHDPDR
Sequences:
>Translated_285_residues MKQRKQETQRLIDENDQLRKQLNVESRHYYEDLIVYMRAHTLFRDDHIVEENLMAILQDLIDAQQNGMDAETYFGKDPAQ TGTEMLKAIPINIVDFVWFNLKLMMMLILLTLLPSLTTSEVKLDGGNLLFVSIIILIATWSLLWIVGSNAFTTPSRTQKV GFFIGGGAIFAGTVGLLFFFKTSWQLTISPQISFILIVSGLIVGALLPFFSRPTGIKLFLYFYSMGYLLLGLLVHLPFTR KIMTAKIHLGAWQWLLWVGLAIFAILIGLVSWWFIRRERRHDPDR >Mature_285_residues MKQRKQETQRLIDENDQLRKQLNVESRHYYEDLIVYMRAHTLFRDDHIVEENLMAILQDLIDAQQNGMDAETYFGKDPAQ TGTEMLKAIPINIVDFVWFNLKLMMMLILLTLLPSLTTSEVKLDGGNLLFVSIIILIATWSLLWIVGSNAFTTPSRTQKV GFFIGGGAIFAGTVGLLFFFKTSWQLTISPQISFILIVSGLIVGALLPFFSRPTGIKLFLYFYSMGYLLLGLLVHLPFTR KIMTAKIHLGAWQWLLWVGLAIFAILIGLVSWWFIRRERRHDPDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32760; Mature: 32760
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRKQETQRLIDENDQLRKQLNVESRHYYEDLIVYMRAHTLFRDDHIVEENLMAILQDL CCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IDAQQNGMDAETYFGKDPAQTGTEMLKAIPINIVDFVWFNLKLMMMLILLTLLPSLTTSE HHHHHCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VKLDGGNLLFVSIIILIATWSLLWIVGSNAFTTPSRTQKVGFFIGGGAIFAGTVGLLFFF EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHH KTSWQLTISPQISFILIVSGLIVGALLPFFSRPTGIKLFLYFYSMGYLLLGLLVHLPFTR HCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH KIMTAKIHLGAWQWLLWVGLAIFAILIGLVSWWFIRRERRHDPDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKQRKQETQRLIDENDQLRKQLNVESRHYYEDLIVYMRAHTLFRDDHIVEENLMAILQDL CCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IDAQQNGMDAETYFGKDPAQTGTEMLKAIPINIVDFVWFNLKLMMMLILLTLLPSLTTSE HHHHHCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VKLDGGNLLFVSIIILIATWSLLWIVGSNAFTTPSRTQKVGFFIGGGAIFAGTVGLLFFF EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHH KTSWQLTISPQISFILIVSGLIVGALLPFFSRPTGIKLFLYFYSMGYLLLGLLVHLPFTR HCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH KIMTAKIHLGAWQWLLWVGLAIFAILIGLVSWWFIRRERRHDPDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA