| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495243
Identifier: 116495243
GI number: 116495243
Start: 1759159
End: 1759452
Strand: Direct
Name: 116495243
Synonym: LSEI_1763
Alternate gene names: NA
Gene position: 1759159-1759452 (Clockwise)
Preceding gene: 116495242
Following gene: 116495247
Centisome position: 60.76
GC content: 47.96
Gene sequence:
>294_bases ATGCGACTGATTAACGTGACCAACAGTTTCAGAAATCTAGTAAGCCAACAATTGAGTGGTACCGATGCCCGGCTGGTCAA GGTCTTCTCACTTGGCCAAACGACAGTTGTTTATACGGAGGCACCTTCCCATATCGAACTTCTTTTCACCAATGAGCGCC GCAATATTCAGCGTGCGGAAATTGCTTTCACACTCGAACGGCTTTTGCAAAAGGACATTGGCGATGTTTCGCCGATTATG GGTCATCATCTGGCAGAAGTGACTGTTCCCAAGCTTGAGCGGCAAGCAGAGTAA
Upstream 100 bases:
>100_bases GAACTTCATTGCGTTCGAGGGCTTTCAATTCACATATTATTATTTTCCGTTAAACTGTTTTATAATAAAAACAGTAGGGA GAGAAATGGAGGGCATGAGC
Downstream 100 bases:
>100_bases CCCGAAGAAGGATAGTGCCATGCTTGCCAATACCAATGAGATTTTTGCACATTGCTAGATTAATAAGCGCACACAAAAAG CGACTGACATTGCTCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MRLINVTNSFRNLVSQQLSGTDARLVKVFSLGQTTVVYTEAPSHIELLFTNERRNIQRAEIAFTLERLLQKDIGDVSPIM GHHLAEVTVPKLERQAE
Sequences:
>Translated_97_residues MRLINVTNSFRNLVSQQLSGTDARLVKVFSLGQTTVVYTEAPSHIELLFTNERRNIQRAEIAFTLERLLQKDIGDVSPIM GHHLAEVTVPKLERQAE >Mature_97_residues MRLINVTNSFRNLVSQQLSGTDARLVKVFSLGQTTVVYTEAPSHIELLFTNERRNIQRAEIAFTLERLLQKDIGDVSPIM GHHLAEVTVPKLERQAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11002; Mature: 11002
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLINVTNSFRNLVSQQLSGTDARLVKVFSLGQTTVVYTEAPSHIELLFTNERRNIQRAE CEEEECHHHHHHHHHHHHCCCHHHHHHHEECCCEEEEEECCCCEEEEEEECCCCCCHHHH IAFTLERLLQKDIGDVSPIMGHHLAEVTVPKLERQAE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLINVTNSFRNLVSQQLSGTDARLVKVFSLGQTTVVYTEAPSHIELLFTNERRNIQRAE CEEEECHHHHHHHHHHHHCCCHHHHHHHEECCCEEEEEECCCCEEEEEEECCCCCCHHHH IAFTLERLLQKDIGDVSPIMGHHLAEVTVPKLERQAE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA