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The map label for this gene is yhdW [H]

Identifier: 116495213

GI number: 116495213

Start: 1726464

End: 1728278

Strand: Direct

Name: yhdW [H]

Synonym: LSEI_1733

Alternate gene names: 116495213

Gene position: 1726464-1728278 (Clockwise)

Preceding gene: 116495212

Following gene: 116495217

Centisome position: 59.63

GC content: 44.57

Gene sequence:

>1815_bases
ATGACGAACGAAAAAATGAAGGTTTGGGCATACTTTAAACACAACGCTGGCGACTTTAGCCGGCATTGGGGCGCGTATAT
CATGCTCATCAGCGTCACTAATCTATTTATTGGGTTAGCTGTGATCCCGTTTTTTAATTTTGCTGCTCAGCAAACGTTGC
GAATTGGTCACGTGCCTTACATTACCTTGACGAACCTCGGACAAATTCTGACTCATGATCCCGGAGTTGCTGCAGTTCTC
ACCTTGTTGGGGCTGCTACTACTGTTATTCGTTTACTGGCAGTTCACCTTCTTGATTCTAGGTATTCAAAACATTCATCG
GCAAACTCGCTTAAGCTTCTTTCAATTAGCAATCGCGACTTTGAAAAAAACCCACCGCCTAACACCGACAACCATCGCTG
TCTTAATCGCTTACTTTGTTTTAATCTTTCCATTTTCAAGCGTTGTTTTCAAAACAAGCTTGCTGGCCAAATTAACCATT
CCCGATTTCATCGTCGATTTTATTTTTGCCCGATGGTATCTCGGCCTACTGGTCATAGCGCTTTACATGATGGGTACCTG
GCTCGCCGTTCGCTTGTTGCCGTTATTACCTGCTTTAATTTTGAGCGAAACCCCTCCTCGAAAAGCGGTTGCCAAAACTT
GGCGGATGACGCGCGGCCAAACTTGGCGCACATTGTTAGCAGTCTTGTTAATCTTCATACCGGTAGCTGTTCTGACCACT
TTGCTGACCATTGGCCTATATTTACTTCAGTCATACTTGGACAGTCACTGGGAACATTGGGCCTTACTTGGAGCAACCAT
CAACCTTGGTGTGTTGCAAGTGGTTATGCTGCTATTAACAGTGTTCTTTACCGTTATGCTTTATCAATTGGGAACCTCGC
AGGCAGAGACATTTCAACTCATTCCCAACCAAGACTTGATTGCCCGAGTCCCAAAACGTCGGCGCAATCTTCTTTTCCGA
ATTGGCGCCGTTGGCTTAATTGCGTTAGTCATCGGTGGCAGCAGTCTTTTCTACTACGCTTATCTGACTGGTGCACTGGC
AAGTCAGCCGTTAACTATCTCACACCGCGGGGTTGATGATGGTAACGGAGTCCAAAATACAATCCCAGCGTTACAAGCCA
CCGCTAAAGAAAAACCGGATTATGTTGAGATGGATTTGCACGAAACCAAAGACCATCAATTTGTCGTCATGCATGACGAG
AACCTGAAAGATCTAACCGGTGTCGATGCCAAACCACATCAGCTGACTTTATCAGAGATGACCAAACTGACAGCTCGCGA
GAATGGGCACACCGCCAAAGTCGCTAGTTTTGACCAGTATTTGGCGGCTGCGGAACGACTGCATCAAAAGTTATTGATCG
AAATTAAGACCACACCTGAAGACAGCCCACAAATGATGAATCATTTTATTCAACTATACGGGCAACGACTTCTAGCCGAT
CATGATCAGTTGCATTCGCTCGATTATCAAGTTGTCACAACCATGCGCAAACAAGTGCCAAAGTTGAAAACTTTTTTCAT
TTTGCCGTATACGCTCGTCTTTCCTGAAACACCAGCTAGTGGTTACACACTTGAAACAACCACGTTAGCCATGCGGGTGA
TTGACGAAGCGCATAATCGTGATCAAAAAGTCTATGCTTGGACTGTCAATGACAGCGATGATATGGAAAAAGTAGCTTTC
ATGGATGCGGATGGGATTATCACAGATCAATTGGGTGAATTAAAAACAACACTATATCAAATGAACCACCATCCAAGTTA
TGCTGATCAGATTTTGCAATATCTGACGAGCTTTTCTGATGATGCTGAAAACTAG

Upstream 100 bases:

>100_bases
GACCGGCCGTATTCACCCGCCTGAGCCGTGAACTTCAGGCTGTCATGCAGACCAAGGGATATACCAACCTTAGCGACTTT
AAAGGACAATTGAAAACCCA

Downstream 100 bases:

>100_bases
CTATCTACAAATAAAGGCACCAAAAAAGGCCATCAACTTTTATTCGTTGATGGTCTTTTTAGTCATTTACTTGAAGTAAT
ACCTAGCTGTTTCTAATGCG

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 604; Mature: 603

Protein sequence:

>604_residues
MTNEKMKVWAYFKHNAGDFSRHWGAYIMLISVTNLFIGLAVIPFFNFAAQQTLRIGHVPYITLTNLGQILTHDPGVAAVL
TLLGLLLLLFVYWQFTFLILGIQNIHRQTRLSFFQLAIATLKKTHRLTPTTIAVLIAYFVLIFPFSSVVFKTSLLAKLTI
PDFIVDFIFARWYLGLLVIALYMMGTWLAVRLLPLLPALILSETPPRKAVAKTWRMTRGQTWRTLLAVLLIFIPVAVLTT
LLTIGLYLLQSYLDSHWEHWALLGATINLGVLQVVMLLLTVFFTVMLYQLGTSQAETFQLIPNQDLIARVPKRRRNLLFR
IGAVGLIALVIGGSSLFYYAYLTGALASQPLTISHRGVDDGNGVQNTIPALQATAKEKPDYVEMDLHETKDHQFVVMHDE
NLKDLTGVDAKPHQLTLSEMTKLTARENGHTAKVASFDQYLAAAERLHQKLLIEIKTTPEDSPQMMNHFIQLYGQRLLAD
HDQLHSLDYQVVTTMRKQVPKLKTFFILPYTLVFPETPASGYTLETTTLAMRVIDEAHNRDQKVYAWTVNDSDDMEKVAF
MDADGIITDQLGELKTTLYQMNHHPSYADQILQYLTSFSDDAEN

Sequences:

>Translated_604_residues
MTNEKMKVWAYFKHNAGDFSRHWGAYIMLISVTNLFIGLAVIPFFNFAAQQTLRIGHVPYITLTNLGQILTHDPGVAAVL
TLLGLLLLLFVYWQFTFLILGIQNIHRQTRLSFFQLAIATLKKTHRLTPTTIAVLIAYFVLIFPFSSVVFKTSLLAKLTI
PDFIVDFIFARWYLGLLVIALYMMGTWLAVRLLPLLPALILSETPPRKAVAKTWRMTRGQTWRTLLAVLLIFIPVAVLTT
LLTIGLYLLQSYLDSHWEHWALLGATINLGVLQVVMLLLTVFFTVMLYQLGTSQAETFQLIPNQDLIARVPKRRRNLLFR
IGAVGLIALVIGGSSLFYYAYLTGALASQPLTISHRGVDDGNGVQNTIPALQATAKEKPDYVEMDLHETKDHQFVVMHDE
NLKDLTGVDAKPHQLTLSEMTKLTARENGHTAKVASFDQYLAAAERLHQKLLIEIKTTPEDSPQMMNHFIQLYGQRLLAD
HDQLHSLDYQVVTTMRKQVPKLKTFFILPYTLVFPETPASGYTLETTTLAMRVIDEAHNRDQKVYAWTVNDSDDMEKVAF
MDADGIITDQLGELKTTLYQMNHHPSYADQILQYLTSFSDDAEN
>Mature_603_residues
TNEKMKVWAYFKHNAGDFSRHWGAYIMLISVTNLFIGLAVIPFFNFAAQQTLRIGHVPYITLTNLGQILTHDPGVAAVLT
LLGLLLLLFVYWQFTFLILGIQNIHRQTRLSFFQLAIATLKKTHRLTPTTIAVLIAYFVLIFPFSSVVFKTSLLAKLTIP
DFIVDFIFARWYLGLLVIALYMMGTWLAVRLLPLLPALILSETPPRKAVAKTWRMTRGQTWRTLLAVLLIFIPVAVLTTL
LTIGLYLLQSYLDSHWEHWALLGATINLGVLQVVMLLLTVFFTVMLYQLGTSQAETFQLIPNQDLIARVPKRRRNLLFRI
GAVGLIALVIGGSSLFYYAYLTGALASQPLTISHRGVDDGNGVQNTIPALQATAKEKPDYVEMDLHETKDHQFVVMHDEN
LKDLTGVDAKPHQLTLSEMTKLTARENGHTAKVASFDQYLAAAERLHQKLLIEIKTTPEDSPQMMNHFIQLYGQRLLADH
DQLHSLDYQVVTTMRKQVPKLKTFFILPYTLVFPETPASGYTLETTTLAMRVIDEAHNRDQKVYAWTVNDSDDMEKVAFM
DADGIITDQLGELKTTLYQMNHHPSYADQILQYLTSFSDDAEN

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 68463; Mature: 68332

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNEKMKVWAYFKHNAGDFSRHWGAYIMLISVTNLFIGLAVIPFFNFAAQQTLRIGHVPY
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ITLTNLGQILTHDPGVAAVLTLLGLLLLLFVYWQFTFLILGIQNIHRQTRLSFFQLAIAT
EECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKTHRLTPTTIAVLIAYFVLIFPFSSVVFKTSLLAKLTIPDFIVDFIFARWYLGLLVIA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
LYMMGTWLAVRLLPLLPALILSETPPRKAVAKTWRMTRGQTWRTLLAVLLIFIPVAVLTT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LLTIGLYLLQSYLDSHWEHWALLGATINLGVLQVVMLLLTVFFTVMLYQLGTSQAETFQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
IPNQDLIARVPKRRRNLLFRIGAVGLIALVIGGSSLFYYAYLTGALASQPLTISHRGVDD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCC
GNGVQNTIPALQATAKEKPDYVEMDLHETKDHQFVVMHDENLKDLTGVDAKPHQLTLSEM
CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCHHCCCCCCCCEEEHHHH
TKLTARENGHTAKVASFDQYLAAAERLHQKLLIEIKTTPEDSPQMMNHFIQLYGQRLLAD
HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHC
HDQLHSLDYQVVTTMRKQVPKLKTFFILPYTLVFPETPASGYTLETTTLAMRVIDEAHNR
HHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCC
DQKVYAWTVNDSDDMEKVAFMDADGIITDQLGELKTTLYQMNHHPSYADQILQYLTSFSD
CCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
DAEN
CCCC
>Mature Secondary Structure 
TNEKMKVWAYFKHNAGDFSRHWGAYIMLISVTNLFIGLAVIPFFNFAAQQTLRIGHVPY
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ITLTNLGQILTHDPGVAAVLTLLGLLLLLFVYWQFTFLILGIQNIHRQTRLSFFQLAIAT
EECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKTHRLTPTTIAVLIAYFVLIFPFSSVVFKTSLLAKLTIPDFIVDFIFARWYLGLLVIA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
LYMMGTWLAVRLLPLLPALILSETPPRKAVAKTWRMTRGQTWRTLLAVLLIFIPVAVLTT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LLTIGLYLLQSYLDSHWEHWALLGATINLGVLQVVMLLLTVFFTVMLYQLGTSQAETFQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
IPNQDLIARVPKRRRNLLFRIGAVGLIALVIGGSSLFYYAYLTGALASQPLTISHRGVDD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCC
GNGVQNTIPALQATAKEKPDYVEMDLHETKDHQFVVMHDENLKDLTGVDAKPHQLTLSEM
CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCHHCCCCCCCCEEEHHHH
TKLTARENGHTAKVASFDQYLAAAERLHQKLLIEIKTTPEDSPQMMNHFIQLYGQRLLAD
HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHC
HDQLHSLDYQVVTTMRKQVPKLKTFFILPYTLVFPETPASGYTLETTTLAMRVIDEAHNR
HHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCC
DQKVYAWTVNDSDDMEKVAFMDADGIITDQLGELKTTLYQMNHHPSYADQILQYLTSFSD
CCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
DAEN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]