| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is mhqA [H]
Identifier: 116495173
GI number: 116495173
Start: 1687352
End: 1688251
Strand: Direct
Name: mhqA [H]
Synonym: LSEI_1692
Alternate gene names: 116495173
Gene position: 1687352-1688251 (Clockwise)
Preceding gene: 116495161
Following gene: 116495174
Centisome position: 58.28
GC content: 49.22
Gene sequence:
>900_bases ATGACCCGTTTGCATCATGTGTCGCTGTTGACCGGTGATGCACCAGCGACAATTCAGTTTTATACAAAGGTTTTAGGTTT ACGTCTGGTCAAAAATACCGTCAATCAGGAGAATGTTCATGTTCGACATCTGTTTTTCGGTGATTACCAAGGAACTCCTG GCAGTGTGGTTACCTTTTTTGCGATTGATCGATTGGGGCATCGCTACGATGGGCAAAATCAATTGGGTGGGATTGATCTT GCCATTCCAACTGGGTCATTGGCATTTTGGGAACAGCGTCTGCGGATGGCAGGTTGTGTGGTGACAGCCACGCTGACCAG TTTAACTTTGGTTGATCCGGCTGATACGCCGGTTCGACTGTTGGTGACCGATCAAACGTTACCAACGCAACTTGTCGTGC CAAACGATGTTCCGGGCGAAAACAAGATTACCGGATTAATTAATGTCGATCTCCCAGTGGCCGATCATGAAGCTGAAAAG ACCTTCTTTCAAACCATGCTGGGTGTGACCCCCGAAAATAATCAATTCAGGCTTGAGGCCGGTAACACCTTGACCCTTAA GCCTAGCCTCACTGATAGCATCAAACGATTTGGCCGCGGAAGCATGGATCATTTTGCGTTAACCGTTGACCATGAAGAAG CGCTGCCGCGACTGGGGACAATTGCCGCACAACATGGCTATGAAGTTGAGGAGTTTGCTGATCGCGGCTGGTTTAAGAGC CTATATGTTCGCGATCCTGCCGATAACCGGATTGAATTTGCCACTACGGAACCCGGCTTTGCGTTAGATGAGCCGCTTGC CCACCTCGGCGAAGGTCTCGGACTGCCGCCGAAGTTCGAGGCACAACGGCAAGCCATTGAAACGTATTTTAAAACCAAAG GAGTGGATTTCCATGATTGA
Upstream 100 bases:
>100_bases TCAAAACAAGGTACGATTAGGTTGATAGAAGCGACTCGCATTCAGCGAATAAGACTGTTATACTTATTTTTAGTAAGTGT ATCAAGGAGGAGGCAATGTC
Downstream 100 bases:
>100_bases ACACACATTATTAGGTATGAACCACGTCACAGCCATGGCCAGCGATCCTCAAGCGATTTTTGACTTCATGAGCAAAACGC TGGGATTGCATCTCATTAAG
Product: lactoylglutathione lyase related lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTRLHHVSLLTGDAPATIQFYTKVLGLRLVKNTVNQENVHVRHLFFGDYQGTPGSVVTFFAIDRLGHRYDGQNQLGGIDL AIPTGSLAFWEQRLRMAGCVVTATLTSLTLVDPADTPVRLLVTDQTLPTQLVVPNDVPGENKITGLINVDLPVADHEAEK TFFQTMLGVTPENNQFRLEAGNTLTLKPSLTDSIKRFGRGSMDHFALTVDHEEALPRLGTIAAQHGYEVEEFADRGWFKS LYVRDPADNRIEFATTEPGFALDEPLAHLGEGLGLPPKFEAQRQAIETYFKTKGVDFHD
Sequences:
>Translated_299_residues MTRLHHVSLLTGDAPATIQFYTKVLGLRLVKNTVNQENVHVRHLFFGDYQGTPGSVVTFFAIDRLGHRYDGQNQLGGIDL AIPTGSLAFWEQRLRMAGCVVTATLTSLTLVDPADTPVRLLVTDQTLPTQLVVPNDVPGENKITGLINVDLPVADHEAEK TFFQTMLGVTPENNQFRLEAGNTLTLKPSLTDSIKRFGRGSMDHFALTVDHEEALPRLGTIAAQHGYEVEEFADRGWFKS LYVRDPADNRIEFATTEPGFALDEPLAHLGEGLGLPPKFEAQRQAIETYFKTKGVDFHD >Mature_298_residues TRLHHVSLLTGDAPATIQFYTKVLGLRLVKNTVNQENVHVRHLFFGDYQGTPGSVVTFFAIDRLGHRYDGQNQLGGIDLA IPTGSLAFWEQRLRMAGCVVTATLTSLTLVDPADTPVRLLVTDQTLPTQLVVPNDVPGENKITGLINVDLPVADHEAEKT FFQTMLGVTPENNQFRLEAGNTLTLKPSLTDSIKRFGRGSMDHFALTVDHEEALPRLGTIAAQHGYEVEEFADRGWFKSL YVRDPADNRIEFATTEPGFALDEPLAHLGEGLGLPPKFEAQRQAIETYFKTKGVDFHD
Specific function: Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 33125; Mature: 32994
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLHHVSLLTGDAPATIQFYTKVLGLRLVKNTVNQENVHVRHLFFGDYQGTPGSVVTFF CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEE AIDRLGHRYDGQNQLGGIDLAIPTGSLAFWEQRLRMAGCVVTATLTSLTLVDPADTPVRL EHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEHHHEEEEECCCCCCEEE LVTDQTLPTQLVVPNDVPGENKITGLINVDLPVADHEAEKTFFQTMLGVTPENNQFRLEA EEECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC GNTLTLKPSLTDSIKRFGRGSMDHFALTVDHEEALPRLGTIAAQHGYEVEEFADRGWFKS CCEEEECCCHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHCCCCHHHHHCCCCEEE LYVRDPADNRIEFATTEPGFALDEPLAHLGEGLGLPPKFEAQRQAIETYFKTKGVDFHD EEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRLHHVSLLTGDAPATIQFYTKVLGLRLVKNTVNQENVHVRHLFFGDYQGTPGSVVTFF CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEE AIDRLGHRYDGQNQLGGIDLAIPTGSLAFWEQRLRMAGCVVTATLTSLTLVDPADTPVRL EHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEHHHEEEEECCCCCCEEE LVTDQTLPTQLVVPNDVPGENKITGLINVDLPVADHEAEKTFFQTMLGVTPENNQFRLEA EEECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC GNTLTLKPSLTDSIKRFGRGSMDHFALTVDHEEALPRLGTIAAQHGYEVEEFADRGWFKS CCEEEECCCHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHCCCCHHHHHCCCCEEE LYVRDPADNRIEFATTEPGFALDEPLAHLGEGLGLPPKFEAQRQAIETYFKTKGVDFHD EEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]