| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116495043
Identifier: 116495043
GI number: 116495043
Start: 1554957
End: 1555190
Strand: Direct
Name: 116495043
Synonym: LSEI_1561
Alternate gene names: NA
Gene position: 1554957-1555190 (Clockwise)
Preceding gene: 116495042
Following gene: 116495071
Centisome position: 53.71
GC content: 47.86
Gene sequence:
>234_bases ATGAATCTCAAGCATCGTACAGCGAGCACAGAAAAGAAAGTCACGCAAAAGCTCGATGACATCCCCCATCCCACACTTGA TGCCACACTCTACTTACTCGTTTTCAGCATCACTGCCATCGGCGGCCTAGTTTCCTATGGCGCCTATCAGCTCTTTAAAC CGGAGCGAAAGTTAGCCCACAAAGCAAAAACACTCGTTGATGAACATGAAGATGACCACCAACACGAGGCATAA
Upstream 100 bases:
>100_bases AATATCAAGCAAATGGCATTCAATTTGATCCAGAATCATCCATGGTCGTAGTCGAGGAATTTCATACTGTGTACCCAGTC GTTCAAACGAGGTGAAAGCA
Downstream 100 bases:
>100_bases AAAAAGCAGGTCACAACGGCCTGCTTTTTGCTTGTTTTGAAGAAGAGGTGGGCAAATCACCAAGGTCTTTGTTTCTATGA AAACAGAACTGCCTATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MNLKHRTASTEKKVTQKLDDIPHPTLDATLYLLVFSITAIGGLVSYGAYQLFKPERKLAHKAKTLVDEHEDDHQHEA
Sequences:
>Translated_77_residues MNLKHRTASTEKKVTQKLDDIPHPTLDATLYLLVFSITAIGGLVSYGAYQLFKPERKLAHKAKTLVDEHEDDHQHEA >Mature_77_residues MNLKHRTASTEKKVTQKLDDIPHPTLDATLYLLVFSITAIGGLVSYGAYQLFKPERKLAHKAKTLVDEHEDDHQHEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8725; Mature: 8725
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKHRTASTEKKVTQKLDDIPHPTLDATLYLLVFSITAIGGLVSYGAYQLFKPERKLAH CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH KAKTLVDEHEDDHQHEA HHHHHHHCCCCCCCCCC >Mature Secondary Structure MNLKHRTASTEKKVTQKLDDIPHPTLDATLYLLVFSITAIGGLVSYGAYQLFKPERKLAH CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH KAKTLVDEHEDDHQHEA HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA