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The map label for this gene is yfiS [H]

Identifier: 116494907

GI number: 116494907

Start: 1413779

End: 1414945

Strand: Direct

Name: yfiS [H]

Synonym: LSEI_1421

Alternate gene names: 116494907

Gene position: 1413779-1414945 (Clockwise)

Preceding gene: 116494902

Following gene: 116494925

Centisome position: 48.83

GC content: 47.73

Gene sequence:

>1167_bases
GTGTCACATAAAAATCTAGGTTGGCAAGCGCAAACAGCAGCGTTTCTTCTCAGTCAAAATTTATTTGTTTTTGGCAGTTC
GACCGTGTTCTATGCTGTGTTGTGGGATATTGCGCTAAAAACGTCGTCAGGGGCATGGATGACCTATGTCTCGCTGGCGA
CCGCGTTGCCAGCGATTTTAATCTCGCTCACGGCTGGCGTGTTGGCCGATCGCTATAATCGTAAAATGTTAATTGTGCTC
TCGGCGGCTGTTGTCACCTTACTGACATTATTAGTTGCGTCTATCTTTGCTTTTATGACGCAAGATCTTTGGTTGCTGCT
CGTGATTGCTGTGATTCGTAGTTTTGGCAACGGTTTAGAAAATCCCGCGGCGAATGCCTTGTTGCCACAACTGGTCCCTG
CCAAGCATCTCACGCGGGTAAATGGTTACAATCAAATCCTGATGGCGGCCATGCTCGTGATGTCGCCGCTGTTGGCTGGT
TATATTTTAAGTGACCTTGGGATTTTTTGGATTTTTGTGGTAGACGCCTTGTCTGCCGCGTTGGCCATCCTGTTTTTGAG
TGTGGTGCACGTACCAACGCCGAGTGCCAGTCATGATCGAGCAGCCAAACGCGCCGATGGGATTCTCGCCGGGTTGCAAT
ATGTCAGACGAACACCGATTTTGCTGGCCTTCATGCTATTTACTGGGTTGGCGTTTATCCTCGTTGCCCCTTCATCACAA
TTATCAACATTGTATGTTAATCGGACATTTGGATCAGAAGTTTGGCATTTGACGTTTAATGAGTGGTTTTGGACCATTGG
CGCGGGACTTGGCGGCCTTTATATCGCCCGTCACAAACATTTTCGCGATCAACTTGGCTTGATTGCCATCGGGTTTGCCG
GCAGTGGGCTTGCCTTTGCCGAGATGGGACTGCCGCAATCCTTTAGCTTCTATTTACTGTTTATGTTTGTTTCCGGAACT
TTTTACCCACTGATTCAAGCCGGTCAAACCATTTATCTTCAGGAAAATGTCCCTGCTGATAAGTTAGGTCGTGTATTTTC
GCTTTGGGCCATCCTATCGACAGGAATTTATCCATTAGCAATGTTGGTCTATGGACCACTGGCAGATCAGGTGCCAATTG
GCCGCATTTTTGTGGTCACAGGCTTGTTGCTCATTGGTGTTGCTTAG

Upstream 100 bases:

>100_bases
AAATGTGCTAATAGTTCGTCTGGCCTAGATCATAGGTTTTTACATCACTTTGATTTACACTAAGGACAGTTTCTATTCTA
ACTGATTTCGGGTGTTGAGA

Downstream 100 bases:

>100_bases
TGGTTCTGGCACCGGCTGCGCAAACTTTCGTGGTAAGCCATTCTGTTCTTTAGTTGCCGCTAGCAGCGCTAATGGGCCAA
AATTCAAAACAAGATCAGTG

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSHKNLGWQAQTAAFLLSQNLFVFGSSTVFYAVLWDIALKTSSGAWMTYVSLATALPAILISLTAGVLADRYNRKMLIVL
SAAVVTLLTLLVASIFAFMTQDLWLLLVIAVIRSFGNGLENPAANALLPQLVPAKHLTRVNGYNQILMAAMLVMSPLLAG
YILSDLGIFWIFVVDALSAALAILFLSVVHVPTPSASHDRAAKRADGILAGLQYVRRTPILLAFMLFTGLAFILVAPSSQ
LSTLYVNRTFGSEVWHLTFNEWFWTIGAGLGGLYIARHKHFRDQLGLIAIGFAGSGLAFAEMGLPQSFSFYLLFMFVSGT
FYPLIQAGQTIYLQENVPADKLGRVFSLWAILSTGIYPLAMLVYGPLADQVPIGRIFVVTGLLLIGVA

Sequences:

>Translated_388_residues
MSHKNLGWQAQTAAFLLSQNLFVFGSSTVFYAVLWDIALKTSSGAWMTYVSLATALPAILISLTAGVLADRYNRKMLIVL
SAAVVTLLTLLVASIFAFMTQDLWLLLVIAVIRSFGNGLENPAANALLPQLVPAKHLTRVNGYNQILMAAMLVMSPLLAG
YILSDLGIFWIFVVDALSAALAILFLSVVHVPTPSASHDRAAKRADGILAGLQYVRRTPILLAFMLFTGLAFILVAPSSQ
LSTLYVNRTFGSEVWHLTFNEWFWTIGAGLGGLYIARHKHFRDQLGLIAIGFAGSGLAFAEMGLPQSFSFYLLFMFVSGT
FYPLIQAGQTIYLQENVPADKLGRVFSLWAILSTGIYPLAMLVYGPLADQVPIGRIFVVTGLLLIGVA
>Mature_387_residues
SHKNLGWQAQTAAFLLSQNLFVFGSSTVFYAVLWDIALKTSSGAWMTYVSLATALPAILISLTAGVLADRYNRKMLIVLS
AAVVTLLTLLVASIFAFMTQDLWLLLVIAVIRSFGNGLENPAANALLPQLVPAKHLTRVNGYNQILMAAMLVMSPLLAGY
ILSDLGIFWIFVVDALSAALAILFLSVVHVPTPSASHDRAAKRADGILAGLQYVRRTPILLAFMLFTGLAFILVAPSSQL
STLYVNRTFGSEVWHLTFNEWFWTIGAGLGGLYIARHKHFRDQLGLIAIGFAGSGLAFAEMGLPQSFSFYLLFMFVSGTF
YPLIQAGQTIYLQENVPADKLGRVFSLWAILSTGIYPLAMLVYGPLADQVPIGRIFVVTGLLLIGVA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42173; Mature: 42041

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHKNLGWQAQTAAFLLSQNLFVFGSSTVFYAVLWDIALKTSSGAWMTYVSLATALPAIL
CCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ISLTAGVLADRYNRKMLIVLSAAVVTLLTLLVASIFAFMTQDLWLLLVIAVIRSFGNGLE
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NPAANALLPQLVPAKHLTRVNGYNQILMAAMLVMSPLLAGYILSDLGIFWIFVVDALSAA
CCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAILFLSVVHVPTPSASHDRAAKRADGILAGLQYVRRTPILLAFMLFTGLAFILVAPSSQ
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LSTLYVNRTFGSEVWHLTFNEWFWTIGAGLGGLYIARHKHFRDQLGLIAIGFAGSGLAFA
CEEEEEEECCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHH
EMGLPQSFSFYLLFMFVSGTFYPLIQAGQTIYLQENVPADKLGRVFSLWAILSTGIYPLA
HCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHH
MLVYGPLADQVPIGRIFVVTGLLLIGVA
HHHHCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHKNLGWQAQTAAFLLSQNLFVFGSSTVFYAVLWDIALKTSSGAWMTYVSLATALPAIL
CCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ISLTAGVLADRYNRKMLIVLSAAVVTLLTLLVASIFAFMTQDLWLLLVIAVIRSFGNGLE
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NPAANALLPQLVPAKHLTRVNGYNQILMAAMLVMSPLLAGYILSDLGIFWIFVVDALSAA
CCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAILFLSVVHVPTPSASHDRAAKRADGILAGLQYVRRTPILLAFMLFTGLAFILVAPSSQ
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LSTLYVNRTFGSEVWHLTFNEWFWTIGAGLGGLYIARHKHFRDQLGLIAIGFAGSGLAFA
CEEEEEEECCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHH
EMGLPQSFSFYLLFMFVSGTFYPLIQAGQTIYLQENVPADKLGRVFSLWAILSTGIYPLA
HCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHH
MLVYGPLADQVPIGRIFVVTGLLLIGVA
HHHHCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]