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The map label for this gene is rbgA [H]

Identifier: 116494883

GI number: 116494883

Start: 1384322

End: 1385182

Strand: Direct

Name: rbgA [H]

Synonym: LSEI_1397

Alternate gene names: 116494883

Gene position: 1384322-1385182 (Clockwise)

Preceding gene: 116494882

Following gene: 116494884

Centisome position: 47.81

GC content: 50.06

Gene sequence:

>861_bases
ATGGCACAAATTCAATGGTTTCCCGGTCACATGGCCAAAGCCCGGAAACAAGTTCAAGAAAAGATTAAACAAGTCGATCT
CGTGCTCGAAGTTGTCGATGCCCGGACGCCGGAATCGTCGCGCAATCCAATGTTGGATGAGCTGGTGGCTGATAAGCCGC
GCATTATGGTGCTGAATAAGCAGGATCTGGCTGATCCGGCGTTGACGGCGGCATGGGTTCAATATTATCAGGATCAAGGG
TTTGCGGCGATTGCGATTGATGCCCAGCATGCCAAGCGATTGCAGCAAATTCCGCAATTGGCGACGAAGTTGATGGCGGA
AAAGATTGCCCGGAAAAAGGCGCGCGGCATTCGTAATCCGATGATTAAGGCGATGTGTATTGGCATCCCCAATGTCGGCA
AGTCGACGGTGTTAAATCGTCTGGTTCGGCGTAACATCGCGGTGACCGGCAACAAACCAGGCGTGACGAAGAATCAACAG
TGGTTGAAGGCCAGTGATAACTTTCAATTGCTTGATACCCCTGGGATTCTTTGGCCGAAGTTTGCCTCACAAGCAATTGG
GATGCGGTTGGCCTTTACAGGTGCAATTGCCGATGCAGTTTTCCAAGAAGACATGGTTGGCTTGTATGGGTTGACTTACT
TTATGGCGCATTATCCAGCTGCTTTGAAAAAGGCATACCATGTCACCGATGATGATTTAAATGAAGCGCCCCATGATCTG
CTGGTTAAGTTGACGAAATCACAAGGTTTCGCTGAGGCTTACGATCGGATGGCTGAGCGCTTGATTTTTGATGCACGACA
AGGAAAATTGGGACGCTTTACCCTCGAGAAGCCTGGTGAGACAGATGCCGACGCTGAGTGA

Upstream 100 bases:

>100_bases
ACAGGCAGTTGTTACTTTTCACATAAATACAGTATGCTAGTCGTTAGGAAATAGTTCATACTGAGATTTTAATTGTCTTA
GTACTAAAGGAGTTACAAAA

Downstream 100 bases:

>100_bases
GTATAAAGCGTTGCTGGCTGCTGACGAAGTTGCACCGGCTATTTTGGCGGCACTTAAAGAAGACAGTCGCATCGGTGCTG
GCAAATTACTGGCAGCGTAT

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MAQIQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDLADPALTAAWVQYYQDQG
FAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIKAMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQ
WLKASDNFQLLDTPGILWPKFASQAIGMRLAFTGAIADAVFQEDMVGLYGLTYFMAHYPAALKKAYHVTDDDLNEAPHDL
LVKLTKSQGFAEAYDRMAERLIFDARQGKLGRFTLEKPGETDADAE

Sequences:

>Translated_286_residues
MAQIQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDLADPALTAAWVQYYQDQG
FAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIKAMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQ
WLKASDNFQLLDTPGILWPKFASQAIGMRLAFTGAIADAVFQEDMVGLYGLTYFMAHYPAALKKAYHVTDDDLNEAPHDL
LVKLTKSQGFAEAYDRMAERLIFDARQGKLGRFTLEKPGETDADAE
>Mature_285_residues
AQIQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDLADPALTAAWVQYYQDQGF
AAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIKAMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQW
LKASDNFQLLDTPGILWPKFASQAIGMRLAFTGAIADAVFQEDMVGLYGLTYFMAHYPAALKKAYHVTDDDLNEAPHDLL
VKLTKSQGFAEAYDRMAERLIFDARQGKLGRFTLEKPGETDADAE

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=257, Percent_Identity=33.4630350194552, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI296317324, Length=242, Percent_Identity=26.0330578512397, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI9506611, Length=242, Percent_Identity=26.0330578512397, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193211047, Length=224, Percent_Identity=33.0357142857143, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17534827, Length=177, Percent_Identity=30.5084745762712, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320842, Length=191, Percent_Identity=30.8900523560209, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6323744, Length=231, Percent_Identity=25.5411255411255, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI85815858, Length=305, Percent_Identity=31.4754098360656, Blast_Score=131, Evalue=6e-31,
Organism=Drosophila melanogaster, GI28572990, Length=227, Percent_Identity=28.1938325991189, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 31972; Mature: 31841

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNK
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEECC
QDLADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNP
HHCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
MIKAMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPK
HHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCEEEECCCCCCCHH
FASQAIGMRLAFTGAIADAVFQEDMVGLYGLTYFMAHYPAALKKAYHVTDDDLNEAPHDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHH
LVKLTKSQGFAEAYDRMAERLIFDARQGKLGRFTLEKPGETDADAE
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
AQIQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNK
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEECC
QDLADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNP
HHCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
MIKAMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPK
HHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCEEEECCCCCCCHH
FASQAIGMRLAFTGAIADAVFQEDMVGLYGLTYFMAHYPAALKKAYHVTDDDLNEAPHDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHH
LVKLTKSQGFAEAYDRMAERLIFDARQGKLGRFTLEKPGETDADAE
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]