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The map label for this gene is scpA [H]

Identifier: 116494856

GI number: 116494856

Start: 1359499

End: 1360224

Strand: Direct

Name: scpA [H]

Synonym: LSEI_1370

Alternate gene names: 116494856

Gene position: 1359499-1360224 (Clockwise)

Preceding gene: 116494855

Following gene: 116494857

Centisome position: 46.96

GC content: 48.76

Gene sequence:

>726_bases
ATGGCACTGACACTCGTGCTGAATGACTTCTCCGGACCGTTAGACTTGCTTTGGCACTTGATTCGGACGAATGAAGTTGA
CATTTACGACATTCCGATCGCTGAGATCACCGCTCAATACCTAGATTACCTGCATCAAATGCAGGATCTGGCGCTGGACG
TGGCCGGCGATTATTTTGTCATGGCCGCTAATTTGATGGTCTTGAAAAGTCGCCTTTTGTTGCCCCAACCTGAACCCGAA
ACGATGGCTCCTGATGAGGCGCCAGATCCACGAGCAGATTTAGTGGCACAACTATTGACCTATCAAGTCTACCAAGAAGC
AGCAAAGGATTTGAAAGCACGCGAGGCTAAACGCGCACAAGCCTATGCCAAGCCAACCACATTGCCAGACGCCAAAATGG
CTGTGCCACTTGCGCCAGGTTCGGTGAAATTAGTTGATTTACAAGCGGCCATGGCGCGTGTGATGAAGGCACAACAAGCC
ACTCGCCAAACCATTGCCCACATTGAAACCGAACCTGTATCCGTTGAAAAACGAATCGGCGAAGTGCTACAGACATTGCA
AAAAGGCGGGCAATGTCTCTTTGCTGATTTACTGTCGGTTCAGTCGGTTGAGCAGGTTGTGACGACTTTTCTGGCTTTGC
TTGAATTGATGAAAAATGATCAGGTTATTTGTGAACAAGAGGCGCCATTTGATCCAATCACAGTGACCTTGAAGGAGGCT
GCTTAA

Upstream 100 bases:

>100_bases
ACTGAACTGACTGAACTTTTCCCAAACAAGAAATTGATGGGTGCCCTTGAACATGCACCGCTAATCGCCGCCTTTAACAA
GTTTCGAAAAGAGGATGACC

Downstream 100 bases:

>100_bases
TGGAGCCAGCACTAGAAGCAATCCTTTACACAGCTGGCGAAAGCGGCGTGACGCTGGGTGAGCTGGCCGGCATTTTAGAA
ATCAGCGAAAGCGCGATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MALTLVLNDFSGPLDLLWHLIRTNEVDIYDIPIAEITAQYLDYLHQMQDLALDVAGDYFVMAANLMVLKSRLLLPQPEPE
TMAPDEAPDPRADLVAQLLTYQVYQEAAKDLKAREAKRAQAYAKPTTLPDAKMAVPLAPGSVKLVDLQAAMARVMKAQQA
TRQTIAHIETEPVSVEKRIGEVLQTLQKGGQCLFADLLSVQSVEQVVTTFLALLELMKNDQVICEQEAPFDPITVTLKEA
A

Sequences:

>Translated_241_residues
MALTLVLNDFSGPLDLLWHLIRTNEVDIYDIPIAEITAQYLDYLHQMQDLALDVAGDYFVMAANLMVLKSRLLLPQPEPE
TMAPDEAPDPRADLVAQLLTYQVYQEAAKDLKAREAKRAQAYAKPTTLPDAKMAVPLAPGSVKLVDLQAAMARVMKAQQA
TRQTIAHIETEPVSVEKRIGEVLQTLQKGGQCLFADLLSVQSVEQVVTTFLALLELMKNDQVICEQEAPFDPITVTLKEA
A
>Mature_240_residues
ALTLVLNDFSGPLDLLWHLIRTNEVDIYDIPIAEITAQYLDYLHQMQDLALDVAGDYFVMAANLMVLKSRLLLPQPEPET
MAPDEAPDPRADLVAQLLTYQVYQEAAKDLKAREAKRAQAYAKPTTLPDAKMAVPLAPGSVKLVDLQAAMARVMKAQQAT
RQTIAHIETEPVSVEKRIGEVLQTLQKGGQCLFADLLSVQSVEQVVTTFLALLELMKNDQVICEQEAPFDPITVTLKEAA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 26656; Mature: 26525

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTLVLNDFSGPLDLLWHLIRTNEVDIYDIPIAEITAQYLDYLHQMQDLALDVAGDYFV
CEEEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
MAANLMVLKSRLLLPQPEPETMAPDEAPDPRADLVAQLLTYQVYQEAAKDLKAREAKRAQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYAKPTTLPDAKMAVPLAPGSVKLVDLQAAMARVMKAQQATRQTIAHIETEPVSVEKRIG
HHCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EVLQTLQKGGQCLFADLLSVQSVEQVVTTFLALLELMKNDQVICEQEAPFDPITVTLKEA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECC
A
C
>Mature Secondary Structure 
ALTLVLNDFSGPLDLLWHLIRTNEVDIYDIPIAEITAQYLDYLHQMQDLALDVAGDYFV
EEEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
MAANLMVLKSRLLLPQPEPETMAPDEAPDPRADLVAQLLTYQVYQEAAKDLKAREAKRAQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYAKPTTLPDAKMAVPLAPGSVKLVDLQAAMARVMKAQQATRQTIAHIETEPVSVEKRIG
HHCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EVLQTLQKGGQCLFADLLSVQSVEQVVTTFLALLELMKNDQVICEQEAPFDPITVTLKEA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566 [H]