Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494847

Identifier: 116494847

GI number: 116494847

Start: 1348893

End: 1349804

Strand: Direct

Name: 116494847

Synonym: LSEI_1361

Alternate gene names: NA

Gene position: 1348893-1349804 (Clockwise)

Preceding gene: 116494846

Following gene: 116494849

Centisome position: 46.59

GC content: 46.82

Gene sequence:

>912_bases
ATGCTGTTGGTCGTTATTGAATTGTGCATAGCGAAAGGATTGTTCGGTTTAATGAAAATTTGGAAATATACCATGGTCGG
CTTATTGGCATTCGTGCTAGCAGGTTGCGGTCAACAATTAAGCACTACCAAAACCTCATATGGGCGTGACGGACTGGTCG
CCATTGTTAAAGGGACGGCCCGCGGTGTGGATCGCGTCAGTTATACAAGTGATGCCGGAAAAGGCAGTGTGCCAGTCAAT
TCAGGCACGTTTGTGGTCAATGTGCCCGTTAGCGATGTGGCTCAAAAGGTGAACCTAAAAGCCGGTAGCATGCAAACTAA
CGTCACGGTGAAAGCCGGTCAATCGCTCGGAACTTATAGCACGATTGCGGCAAAGTTTAATCAAATGCTGGCGGTATCCA
GTCTACCTAAAGCGGATCAAGCCAAGCTAAAACAGGCACAGGCTGCAAGTGCCAATGCTCAAAAGAACGTTGCGACCATG
AGTCCAACTGAGAAAATGGCAATGGCTCAGCAAGCACAACAATTGAAGACACTGATGGCTCAGGCCAATGCCAATACCAA
AGCATCCCAACTGCCGGCAACGGCGAAGACGGGCATTCATTCAATCTTAAAATCAGCAAGCGGCGATTACCGCGCAAGTA
TTGTTGATGGCAAGGCAATGGGGTTTGCCGTTGTGGTACCATTATCAGTTTTGAAAAACAGCAAGAAGATGCAGACGTTT
GCCACTGACTTCGGGTTACTCACAACTTCGGTCGGTGCTGATGCCAAGTCAGTTTTCTCGCAATTTAAGAAATTGACGAA
GGATGCTAAGTCTAAAAACAATGCGACGACCATTAGCACAATCAAGAGTCACGGCGTCAAAATTGATGTTGGTTATTCCA
CCACAGCACTTTACCTGTATGTGACAAAATAA

Upstream 100 bases:

>100_bases
ACACCCATTAATCAAGGCAACTGCTGACCAAAACTTTAATGTTTTACCGTCAATGTGACAGTGAGTCATATTTCGCTTGT
CAAGCAGCGAAGGAACGCTT

Downstream 100 bases:

>100_bases
GCTTGCGTCACTCATTCCAAAAACGTCAGCACATGCAAAGTGCCCGGTTATTGTTAGACATGCCAGTCTAGCAATAATCG
GGCACTTTGACGTCATTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLLVVIELCIAKGLFGLMKIWKYTMVGLLAFVLAGCGQQLSTTKTSYGRDGLVAIVKGTARGVDRVSYTSDAGKGSVPVN
SGTFVVNVPVSDVAQKVNLKAGSMQTNVTVKAGQSLGTYSTIAAKFNQMLAVSSLPKADQAKLKQAQAASANAQKNVATM
SPTEKMAMAQQAQQLKTLMAQANANTKASQLPATAKTGIHSILKSASGDYRASIVDGKAMGFAVVVPLSVLKNSKKMQTF
ATDFGLLTTSVGADAKSVFSQFKKLTKDAKSKNNATTISTIKSHGVKIDVGYSTTALYLYVTK

Sequences:

>Translated_303_residues
MLLVVIELCIAKGLFGLMKIWKYTMVGLLAFVLAGCGQQLSTTKTSYGRDGLVAIVKGTARGVDRVSYTSDAGKGSVPVN
SGTFVVNVPVSDVAQKVNLKAGSMQTNVTVKAGQSLGTYSTIAAKFNQMLAVSSLPKADQAKLKQAQAASANAQKNVATM
SPTEKMAMAQQAQQLKTLMAQANANTKASQLPATAKTGIHSILKSASGDYRASIVDGKAMGFAVVVPLSVLKNSKKMQTF
ATDFGLLTTSVGADAKSVFSQFKKLTKDAKSKNNATTISTIKSHGVKIDVGYSTTALYLYVTK
>Mature_303_residues
MLLVVIELCIAKGLFGLMKIWKYTMVGLLAFVLAGCGQQLSTTKTSYGRDGLVAIVKGTARGVDRVSYTSDAGKGSVPVN
SGTFVVNVPVSDVAQKVNLKAGSMQTNVTVKAGQSLGTYSTIAAKFNQMLAVSSLPKADQAKLKQAQAASANAQKNVATM
SPTEKMAMAQQAQQLKTLMAQANANTKASQLPATAKTGIHSILKSASGDYRASIVDGKAMGFAVVVPLSVLKNSKKMQTF
ATDFGLLTTSVGADAKSVFSQFKKLTKDAKSKNNATTISTIKSHGVKIDVGYSTTALYLYVTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31781; Mature: 31781

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVVIELCIAKGLFGLMKIWKYTMVGLLAFVLAGCGQQLSTTKTSYGRDGLVAIVKGTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCEEEEEECCC
RGVDRVSYTSDAGKGSVPVNSGTFVVNVPVSDVAQKVNLKAGSMQTNVTVKAGQSLGTYS
CCCCCCEECCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
TIAAKFNQMLAVSSLPKADQAKLKQAQAASANAQKNVATMSPTEKMAMAQQAQQLKTLMA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH
QANANTKASQLPATAKTGIHSILKSASGDYRASIVDGKAMGFAVVVPLSVLKNSKKMQTF
HCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEHHHHCCCHHHHHH
ATDFGLLTTSVGADAKSVFSQFKKLTKDAKSKNNATTISTIKSHGVKIDVGYSTTALYLY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCEEEEEEE
VTK
EEC
>Mature Secondary Structure
MLLVVIELCIAKGLFGLMKIWKYTMVGLLAFVLAGCGQQLSTTKTSYGRDGLVAIVKGTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCEEEEEECCC
RGVDRVSYTSDAGKGSVPVNSGTFVVNVPVSDVAQKVNLKAGSMQTNVTVKAGQSLGTYS
CCCCCCEECCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
TIAAKFNQMLAVSSLPKADQAKLKQAQAASANAQKNVATMSPTEKMAMAQQAQQLKTLMA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH
QANANTKASQLPATAKTGIHSILKSASGDYRASIVDGKAMGFAVVVPLSVLKNSKKMQTF
HCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEHHHHCCCHHHHHH
ATDFGLLTTSVGADAKSVFSQFKKLTKDAKSKNNATTISTIKSHGVKIDVGYSTTALYLY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCEEEEEEE
VTK
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA