BacMap

Definition	Lactobacillus casei ATCC 334, complete genome.
Accession	NC_008526
Length	2,895,264

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The map label for this gene is yqjQ [H]

Identifier: 116494841

GI number: 116494841

Start: 1341923

End: 1342705

Strand: Direct

Name: yqjQ [H]

Synonym: LSEI_1354

Alternate gene names: 116494841

Gene position: 1341923-1342705 (Clockwise)

Preceding gene: 116494840

Following gene: 116494842

Centisome position: 46.35

GC content: 48.53

Gene sequence:

>783_bases
ATGAACCAACATCCGACGGTGGTTATTTCTGGAGGATCGTCAGGCTTAGGCAAGGCGATTGGACTTGAGGCAGCAAAGCA
AGGCGCAACCGTTGTCTTTTTGGCGCGGCGGCGGGAGAAATTACGTCAAGCACAGGCAGAGGCCAGCACGCTTTCCGGCC
GACCAGCTTATGCTTTCCCTGTTGATGTTGCTGACCCAGTTGCAATTGAAGCGACCGTTGATCAAATTCACGAAACGGTT
GGGCCAGTTGATATTCTGGTGAATGCCGCTGGGTTTGGTCATTTTGAAACAGCCTTCGATACCGATATGCAGGTAGTAGA
GCGCATGTTTCGGGTGAATGTGCTGGGGATGATGTATCTGACGAAGTTGCTGGGTCGCGATATGGTCACGCGTCAGCAAG
GACAAATCATTAACATTGCTTCAATGGCTGGAAAAATGGCGACGCCTAAGTCAGCTATCTACTCAGCAACCAAATTTGCG
GTGCTTGGGTATAGTAATGGCTTACGTCTTGAACTGAAGCCATTCGGTGTTAAGGTGACCACGGTTAATCCGGGACCAAT
TGCCACGAATTTCTTTAGCGAAGCCAATGCGTTAGACTATTTGGCTAGCGTTTCTTGGCTGGTTTTGGATCCAGATAAAT
TAGCGCGGCGAATTGTAGCGACATTTGGTCGACCAGTTCGGGAAATCAATGCACCGTGGTTTATGAATCTTGGCGCAGAT
TTTTATACCTTGTTCCCGCATTTGGGCGATTGGTTAGCTGCTGGTATGTTTAATAAGAAGTAA

Upstream 100 bases:

>100_bases
AACATTCCATTTCGGAGTGAACAATCGGAACCTGCTGTCACAGTTAAATCATAAAGCTCAGCGGTAGCAAGTGAATATCA
AAACAGAGGAGGAAATCATG

Downstream 100 bases:

>100_bases
AGGGGTAGGTCGTATGAAGGGTCAACAACGTTTTATTATTGGGTTAGTTCTGGCATTGATTTTAATTGTTTTTGCCTTGT
TGAATGGGCAAGACGTTTCG

Product: Short-chain dehydrogenase of various substrate specificities

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNQHPTVVISGGSSGLGKAIGLEAAKQGATVVFLARRREKLRQAQAEASTLSGRPAYAFPVDVADPVAIEATVDQIHETV
GPVDILVNAAGFGHFETAFDTDMQVVERMFRVNVLGMMYLTKLLGRDMVTRQQGQIINIASMAGKMATPKSAIYSATKFA
VLGYSNGLRLELKPFGVKVTTVNPGPIATNFFSEANALDYLASVSWLVLDPDKLARRIVATFGRPVREINAPWFMNLGAD
FYTLFPHLGDWLAAGMFNKK

Sequences:

>Translated_260_residues
MNQHPTVVISGGSSGLGKAIGLEAAKQGATVVFLARRREKLRQAQAEASTLSGRPAYAFPVDVADPVAIEATVDQIHETV
GPVDILVNAAGFGHFETAFDTDMQVVERMFRVNVLGMMYLTKLLGRDMVTRQQGQIINIASMAGKMATPKSAIYSATKFA
VLGYSNGLRLELKPFGVKVTTVNPGPIATNFFSEANALDYLASVSWLVLDPDKLARRIVATFGRPVREINAPWFMNLGAD
FYTLFPHLGDWLAAGMFNKK
>Mature_260_residues
MNQHPTVVISGGSSGLGKAIGLEAAKQGATVVFLARRREKLRQAQAEASTLSGRPAYAFPVDVADPVAIEATVDQIHETV
GPVDILVNAAGFGHFETAFDTDMQVVERMFRVNVLGMMYLTKLLGRDMVTRQQGQIINIASMAGKMATPKSAIYSATKFA
VLGYSNGLRLELKPFGVKVTTVNPGPIATNFFSEANALDYLASVSWLVLDPDKLARRIVATFGRPVREINAPWFMNLGAD
FYTLFPHLGDWLAAGMFNKK

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4503817, Length=249, Percent_Identity=34.9397590361446, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI7706318, Length=195, Percent_Identity=32.3076923076923, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI20149619, Length=260, Percent_Identity=32.3076923076923, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI210032110, Length=255, Percent_Identity=27.0588235294118, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI40254992, Length=181, Percent_Identity=31.4917127071823, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI142976729, Length=188, Percent_Identity=30.8510638297872, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI7705855, Length=190, Percent_Identity=32.1052631578947, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI109715829, Length=192, Percent_Identity=32.2916666666667, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI157739938, Length=187, Percent_Identity=28.8770053475936, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI7657478, Length=212, Percent_Identity=29.7169811320755, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI40807363, Length=217, Percent_Identity=27.6497695852535, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4557649, Length=194, Percent_Identity=29.8969072164948, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI32455239, Length=196, Percent_Identity=30.1020408163265, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI5031765, Length=196, Percent_Identity=30.1020408163265, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI210032112, Length=177, Percent_Identity=27.1186440677966, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI44680136, Length=110, Percent_Identity=38.1818181818182, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI44680133, Length=110, Percent_Identity=38.1818181818182, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI17738292, Length=110, Percent_Identity=38.1818181818182, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI226371731, Length=222, Percent_Identity=28.3783783783784, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI32483357, Length=189, Percent_Identity=29.1005291005291, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI223718074, Length=193, Percent_Identity=29.5336787564767, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI310128830, Length=197, Percent_Identity=27.9187817258883, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI310115468, Length=197, Percent_Identity=27.9187817258883, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI31543615, Length=226, Percent_Identity=26.5486725663717, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI5031737, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI7705925, Length=186, Percent_Identity=26.3440860215054, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI33667109, Length=186, Percent_Identity=30.1075268817204, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4758504, Length=210, Percent_Identity=28.0952380952381, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI40548397, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI214010158, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI214010156, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI22758144, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI25282469, Length=213, Percent_Identity=26.2910798122066, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI59889578, Length=141, Percent_Identity=31.9148936170213, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI15277342, Length=194, Percent_Identity=27.8350515463918, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI10190704, Length=180, Percent_Identity=25.5555555555556, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4504503, Length=192, Percent_Identity=28.125, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1787820, Length=188, Percent_Identity=32.9787234042553, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786701, Length=192, Percent_Identity=29.6875, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI87082100, Length=205, Percent_Identity=31.219512195122, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787335, Length=184, Percent_Identity=31.5217391304348, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790717, Length=237, Percent_Identity=28.2700421940928, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87082160, Length=188, Percent_Identity=28.7234042553192, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI2367365, Length=188, Percent_Identity=32.4468085106383, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789057, Length=191, Percent_Identity=30.8900523560209, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789378, Length=189, Percent_Identity=29.1005291005291, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI2367175, Length=194, Percent_Identity=27.8350515463918, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788459, Length=183, Percent_Identity=28.4153005464481, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787905, Length=230, Percent_Identity=27.3913043478261, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787526, Length=192, Percent_Identity=26.5625, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789208, Length=186, Percent_Identity=26.3440860215054, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=217, Percent_Identity=31.3364055299539, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17570069, Length=197, Percent_Identity=35.0253807106599, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71997402, Length=197, Percent_Identity=31.9796954314721, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17564282, Length=189, Percent_Identity=31.2169312169312, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193203117, Length=189, Percent_Identity=32.2751322751323, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI193203115, Length=189, Percent_Identity=32.2751322751323, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=193, Percent_Identity=30.0518134715026, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17567345, Length=186, Percent_Identity=29.5698924731183, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=199, Percent_Identity=29.6482412060301, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=192, Percent_Identity=30.2083333333333, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17560220, Length=192, Percent_Identity=30.7291666666667, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=193, Percent_Identity=29.0155440414508, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=234, Percent_Identity=29.4871794871795, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=195, Percent_Identity=28.7179487179487, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=190, Percent_Identity=28.9473684210526, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=192, Percent_Identity=27.6041666666667, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI115534660, Length=213, Percent_Identity=26.7605633802817, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=197, Percent_Identity=27.4111675126904, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=189, Percent_Identity=27.5132275132275, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=193, Percent_Identity=29.5336787564767, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=243, Percent_Identity=27.5720164609054, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=192, Percent_Identity=28.125, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=198, Percent_Identity=29.7979797979798, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=204, Percent_Identity=28.921568627451, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=201, Percent_Identity=29.8507462686567, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=192, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=193, Percent_Identity=30.0518134715026, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=185, Percent_Identity=30.2702702702703, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32563809, Length=185, Percent_Identity=27.027027027027, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17507613, Length=185, Percent_Identity=27.027027027027, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=183, Percent_Identity=27.8688524590164, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=197, Percent_Identity=29.4416243654822, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=196, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=184, Percent_Identity=28.804347826087, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193210355, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71997099, Length=205, Percent_Identity=28.780487804878, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI212646214, Length=191, Percent_Identity=28.2722513089005, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17559552, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=195, Percent_Identity=24.6153846153846, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25152911, Length=195, Percent_Identity=29.2307692307692, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17558628, Length=191, Percent_Identity=31.413612565445, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71982365, Length=188, Percent_Identity=30.3191489361702, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322067, Length=185, Percent_Identity=32.4324324324324, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6323882, Length=196, Percent_Identity=29.0816326530612, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320089, Length=258, Percent_Identity=27.5193798449612, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21358495, Length=239, Percent_Identity=34.7280334728033, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24580925, Length=196, Percent_Identity=30.6122448979592, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI21357041, Length=227, Percent_Identity=28.1938325991189, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI221510726, Length=200, Percent_Identity=30.5, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI281364892, Length=257, Percent_Identity=28.0155642023346, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28571526, Length=236, Percent_Identity=29.2372881355932, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24644339, Length=191, Percent_Identity=32.9842931937173, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI116007236, Length=203, Percent_Identity=31.0344827586207, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24640442, Length=223, Percent_Identity=29.1479820627803, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24641232, Length=203, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571387, Length=232, Percent_Identity=27.5862068965517, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI21355631, Length=166, Percent_Identity=27.1084337349398, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI23397609, Length=197, Percent_Identity=29.4416243654822, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24649181, Length=249, Percent_Identity=28.1124497991968, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007238, Length=185, Percent_Identity=30.8108108108108, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI161076933, Length=241, Percent_Identity=28.6307053941909, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116007234, Length=229, Percent_Identity=29.6943231441048, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24581726, Length=190, Percent_Identity=27.3684210526316, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24584748, Length=241, Percent_Identity=28.6307053941909, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356301, Length=192, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24640492, Length=187, Percent_Identity=27.807486631016, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281364494, Length=202, Percent_Identity=28.2178217821782, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24663911, Length=197, Percent_Identity=28.9340101522843, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24651139, Length=191, Percent_Identity=29.3193717277487, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24584744, Length=187, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574402, Length=187, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007232, Length=181, Percent_Identity=30.939226519337, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357673, Length=188, Percent_Identity=29.2553191489362, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24644337, Length=184, Percent_Identity=31.5217391304348, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17737361, Length=197, Percent_Identity=27.9187817258883, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24648693, Length=195, Percent_Identity=27.6923076923077, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355889, Length=195, Percent_Identity=27.6923076923077, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584752, Length=188, Percent_Identity=25, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24641388, Length=205, Percent_Identity=28.2926829268293, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355319, Length=185, Percent_Identity=27.5675675675676, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24639444, Length=185, Percent_Identity=26.4864864864865, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28224; Mature: 28224

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQHPTVVISGGSSGLGKAIGLEAAKQGATVVFLARRREKLRQAQAEASTLSGRPAYAFP
CCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEE
VDVADPVAIEATVDQIHETVGPVDILVNAAGFGHFETAFDTDMQVVERMFRVNVLGMMYL
CCCCCCEEEHHHHHHHHHHHCCHHEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
TKLLGRDMVTRQQGQIINIASMAGKMATPKSAIYSATKFAVLGYSNGLRLELKPFGVKVT
HHHHCCHHHHHCCCCEEEHHHHCCCCCCCHHHHHHHHEEEEEECCCCCEEEEEECEEEEE
TVNPGPIATNFFSEANALDYLASVSWLVLDPDKLARRIVATFGRPVREINAPWFMNLGAD
EECCCCCHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHCCHHHHCCCCEEEECCCH
FYTLFPHLGDWLAAGMFNKK
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNQHPTVVISGGSSGLGKAIGLEAAKQGATVVFLARRREKLRQAQAEASTLSGRPAYAFP
CCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEE
VDVADPVAIEATVDQIHETVGPVDILVNAAGFGHFETAFDTDMQVVERMFRVNVLGMMYL
CCCCCCEEEHHHHHHHHHHHCCHHEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
TKLLGRDMVTRQQGQIINIASMAGKMATPKSAIYSATKFAVLGYSNGLRLELKPFGVKVT
HHHHCCHHHHHCCCCEEEHHHHCCCCCCCHHHHHHHHEEEEEECCCCCEEEEEECEEEEE
TVNPGPIATNFFSEANALDYLASVSWLVLDPDKLARRIVATFGRPVREINAPWFMNLGAD
EECCCCCHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHCCHHHHCCCCEEEECCCH
FYTLFPHLGDWLAAGMFNKK
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]