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The map label for this gene is yecS [H]

Identifier: 116494831

GI number: 116494831

Start: 1327283

End: 1328740

Strand: Direct

Name: yecS [H]

Synonym: LSEI_1344

Alternate gene names: 116494831

Gene position: 1327283-1328740 (Clockwise)

Preceding gene: 116494829

Following gene: 116494832

Centisome position: 45.84

GC content: 45.75

Gene sequence:

>1458_bases
ATGAAGCATTTGAGACGCTGGTTGATCGCTTTAGTCGCTGTTTTTGCGGCTGTTGTGACATTGAATATGCAAACGGTCCA
TGCTGATGACAGCTTGGCCAAGGTTCAACAAAAAGGTACGTTGGTGATGGGCACGAGCCCTGATTATGCGCCGTATGAAT
TTTTAGTCAACAAGAATGGCAAGAATCAAGTTGTTGGCATGGATGTTGAAGTTGCGCGTAAGATTGCCAAGGATCTGGGT
GTAAAGCTGGTCATTAAACAGATGAACTTTAACTCACTTCTGGTCGCCTTGCAGACGGGTAAGGTCGACATGGTGTTGGC
GGCGATGTCACCGACGAATGCCCGACGGAAGTCAGTTGACTTTTCAAATACGTACTACAAGTCTGGACAAGACATTTTGG
TCAACAAAACGGATGCTAAGATCTACAAAGACCATAAAAGTTTTGCGAACAAGAAAGTCGGCGTCCAGAATGGCAGCTTG
CAAGAGACGTTAGCGAAAACACAGATGAAGACGAGTTCCACATTGGGCTTGACTAAGGTCACCGACCTGATTTTGGCGTT
GAAGACACATAAGGTAGCTGGTGTTGTCGCTGAAGGTGCGGTAGCGAAGGCTTACACGTCAAATGATGATTCGTTAGTTG
AGATTCCCGGTCACTTCAACTTATCAAGCGACACAGTCGGTACCGCGATAGGATTTGCTAAGAACTCTGATTCATTAGTG
GCAGCCGCCAACAAGAGCTTGGCAGAGATTAAGCAAAAAGGTTTAATTAACCAGTATCTCAAAACTGCTGGCAGTTACAT
GAAAACCAATACTGAAGATACCAGTATGATCCATTACTGGACCTACTTCCTAAAAGGGGTCGAGTATACGCTCTTGATTA
GTGCTATCGGTGCTTTCTTCGGGGTTCTACTCGGCACGATCTTCGCCTTGCTGCGGTTGAGCAAGAATAAACTGTCACAT
TTAATAGGTGTGTCATACATTGAGTTCGTTCGTGGCACTCCGCTGATGATTCAAGTCATGTTTGTCTATTTCGGCATAGG
GATCTTCATTGATATTCCTGCGCTAATAGCAGGGTTGATTGCTGTTTCCTTGAACTCGGCGGCGTATGTGGCTGAAATTA
TCCGTAGCGGGATCGATAGCATTCCAGTGGGGCAAACAGAAGCTGCCCGTTCGCTCGGTCTGTCAGAGCGGCAGACGATG
ATAAGCGTTGTTTTACCACAAGCAATCAAGAATATTTGGCCAGCGCTTGGTAACGAATTTATCTCCTTGATTAAGGAAAG
CTCGATTGTTTCCATTATCGGGGTTACCGATCTGATTTATCAGTTAACGGTTGTCCAAACCGCGACATACAAGGGAGTTC
AACCAATCCTTGTCGCGATGGCCCTCTACTTTGTTCTGACATTCGGGCTGTCCAAGCTCTTGAGTCATTTTGAAAGGAAG
ATGAATCATGCAGCATAA

Upstream 100 bases:

>100_bases
GGTAAGTCGCCCGAACAAAAAAATTTGGAAAAATATGAATGCATATTGCATAAAAATCAATTTGAGTGTATAGTACACTC
TTGTAATCAAGGAGGGTATT

Downstream 100 bases:

>100_bases
ACCTTTAATCCAAATCAATCACCTCACCAAAAAGTTTGGCGACAATGTTGTTTTGAACGATATCACCGAAACCATTGACA
AAGGCGATGTGATCGTTGTT

Product: ABC-type amino acid transport system, permease and periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MKHLRRWLIALVAVFAAVVTLNMQTVHADDSLAKVQQKGTLVMGTSPDYAPYEFLVNKNGKNQVVGMDVEVARKIAKDLG
VKLVIKQMNFNSLLVALQTGKVDMVLAAMSPTNARRKSVDFSNTYYKSGQDILVNKTDAKIYKDHKSFANKKVGVQNGSL
QETLAKTQMKTSSTLGLTKVTDLILALKTHKVAGVVAEGAVAKAYTSNDDSLVEIPGHFNLSSDTVGTAIGFAKNSDSLV
AAANKSLAEIKQKGLINQYLKTAGSYMKTNTEDTSMIHYWTYFLKGVEYTLLISAIGAFFGVLLGTIFALLRLSKNKLSH
LIGVSYIEFVRGTPLMIQVMFVYFGIGIFIDIPALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTM
ISVVLPQAIKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMALYFVLTFGLSKLLSHFERK
MNHAA

Sequences:

>Translated_485_residues
MKHLRRWLIALVAVFAAVVTLNMQTVHADDSLAKVQQKGTLVMGTSPDYAPYEFLVNKNGKNQVVGMDVEVARKIAKDLG
VKLVIKQMNFNSLLVALQTGKVDMVLAAMSPTNARRKSVDFSNTYYKSGQDILVNKTDAKIYKDHKSFANKKVGVQNGSL
QETLAKTQMKTSSTLGLTKVTDLILALKTHKVAGVVAEGAVAKAYTSNDDSLVEIPGHFNLSSDTVGTAIGFAKNSDSLV
AAANKSLAEIKQKGLINQYLKTAGSYMKTNTEDTSMIHYWTYFLKGVEYTLLISAIGAFFGVLLGTIFALLRLSKNKLSH
LIGVSYIEFVRGTPLMIQVMFVYFGIGIFIDIPALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTM
ISVVLPQAIKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMALYFVLTFGLSKLLSHFERK
MNHAA
>Mature_485_residues
MKHLRRWLIALVAVFAAVVTLNMQTVHADDSLAKVQQKGTLVMGTSPDYAPYEFLVNKNGKNQVVGMDVEVARKIAKDLG
VKLVIKQMNFNSLLVALQTGKVDMVLAAMSPTNARRKSVDFSNTYYKSGQDILVNKTDAKIYKDHKSFANKKVGVQNGSL
QETLAKTQMKTSSTLGLTKVTDLILALKTHKVAGVVAEGAVAKAYTSNDDSLVEIPGHFNLSSDTVGTAIGFAKNSDSLV
AAANKSLAEIKQKGLINQYLKTAGSYMKTNTEDTSMIHYWTYFLKGVEYTLLISAIGAFFGVLLGTIFALLRLSKNKLSH
LIGVSYIEFVRGTPLMIQVMFVYFGIGIFIDIPALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTM
ISVVLPQAIKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMALYFVLTFGLSKLLSHFERK
MNHAA

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=203, Percent_Identity=40.8866995073892, Blast_Score=149, Evalue=5e-37,
Organism=Escherichia coli, GI1787030, Length=202, Percent_Identity=33.6633663366337, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI87082239, Length=213, Percent_Identity=36.150234741784, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=32.0574162679426, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1787087, Length=214, Percent_Identity=30.3738317757009, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI48994930, Length=166, Percent_Identity=33.1325301204819, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787031, Length=228, Percent_Identity=31.140350877193, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788646, Length=209, Percent_Identity=26.3157894736842, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786874, Length=177, Percent_Identity=29.9435028248588, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1787085, Length=220, Percent_Identity=26.3636363636364, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788645, Length=214, Percent_Identity=28.5046728971963, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787086, Length=182, Percent_Identity=29.1208791208791, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788228, Length=262, Percent_Identity=25.1908396946565, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787088, Length=217, Percent_Identity=26.2672811059908, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788649, Length=244, Percent_Identity=26.2295081967213, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1788648, Length=247, Percent_Identity=27.1255060728745, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 52716; Mature: 52716

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLRRWLIALVAVFAAVVTLNMQTVHADDSLAKVQQKGTLVMGTSPDYAPYEFLVNKNG
CHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCEEECCCCCCCCEEEEEECCC
KNQVVGMDVEVARKIAKDLGVKLVIKQMNFNSLLVALQTGKVDMVLAAMSPTNARRKSVD
CCCEEECCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCHHHCCC
FSNTYYKSGQDILVNKTDAKIYKDHKSFANKKVGVQNGSLQETLAKTQMKTSSTLGLTKV
CCCHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHH
TDLILALKTHKVAGVVAEGAVAKAYTSNDDSLVEIPGHFNLSSDTVGTAIGFAKNSDSLV
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCEE
AAANKSLAEIKQKGLINQYLKTAGSYMKTNTEDTSMIHYWTYFLKGVEYTLLISAIGAFF
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
GVLLGTIFALLRLSKNKLSHLIGVSYIEFVRGTPLMIQVMFVYFGIGIFIDIPALIAGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNIWPALGNEF
HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMALYFVLTFGLSKLLSHFERK
HHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNHAA
HCCCC
>Mature Secondary Structure
MKHLRRWLIALVAVFAAVVTLNMQTVHADDSLAKVQQKGTLVMGTSPDYAPYEFLVNKNG
CHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCEEECCCCCCCCEEEEEECCC
KNQVVGMDVEVARKIAKDLGVKLVIKQMNFNSLLVALQTGKVDMVLAAMSPTNARRKSVD
CCCEEECCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCHHHCCC
FSNTYYKSGQDILVNKTDAKIYKDHKSFANKKVGVQNGSLQETLAKTQMKTSSTLGLTKV
CCCHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHH
TDLILALKTHKVAGVVAEGAVAKAYTSNDDSLVEIPGHFNLSSDTVGTAIGFAKNSDSLV
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCEE
AAANKSLAEIKQKGLINQYLKTAGSYMKTNTEDTSMIHYWTYFLKGVEYTLLISAIGAFF
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
GVLLGTIFALLRLSKNKLSHLIGVSYIEFVRGTPLMIQVMFVYFGIGIFIDIPALIAGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNIWPALGNEF
HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMALYFVLTFGLSKLLSHFERK
HHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNHAA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]