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The map label for this gene is 116494820

Identifier: 116494820

GI number: 116494820

Start: 1315639

End: 1316550

Strand: Direct

Name: 116494820

Synonym: LSEI_1331

Alternate gene names: NA

Gene position: 1315639-1316550 (Clockwise)

Preceding gene: 116494819

Following gene: 116494821

Centisome position: 45.44

GC content: 47.59

Gene sequence:

>912_bases
ATGGCAAAAATGGTTTCATTACCGGATAATGAAAAACGTCATTTTGACATCGGCGAGCAAGCTTTGCAGAAGGGCAATTA
TGCTTCGGCAGCGGCTCATTTTGAAAAAGCCTATGAAGCAGATCAATCGTATGCAATTGCCCAACCGTTGGCCGCAAGTT
TGAATGGCTTGAAGCAGTTTCACGAAAGCTTAAATGTGATGTTGCCACACTATCAAGCTTTCATGCAGACAGACGCAGAC
GTTCAGTTAATGTTGGATGCCTGGTTAGGGACACTCAATTTTGTCATGGCACGTGGCATGTTGCGCCATTTTGATGCGGT
GCGGCGTGCTACTTTTGACCGACAAATTGACGCTGCCGAGGCACTTGCTTTAAGTAGCCATGGTGAACAGATTGCTTCAT
TGGTGCGAAAAATCAGCCATCTCGGCGGCTTTTCGCGGCAGGAGCAGCAAGATTTGTTCAGCCAAATTGGCATTTTGCCA
AAAGCGGCGTTAGTTGAAGCAGCTGTGCCTAATTTGGCCGATCAAACGGTTCCTGTTGCGATGCGCGTGTCTTTGCTAGA
TTTGTTGACAAGTATCAGTTATAACCAACCTGTCAGATATCAGGCATATGACCGCATTGAAACCCTTGTGCCAAATGAGT
TGCCTGGAATGGCGGAGGAAAAAAGCGGACCGGCCATTTTGACTCAGTTGCAAGCTGCCTTGGGCGATGATGATCAGGAA
CTAGGGACGGCATTGGTTCAGATGGCGCGGGTGCAAATTGCCTTTCTCTATCCCGATATTGACCGTCTGATTCCAGATCC
AGCTGCATTCGTCCAAGCTTATTTGGATCATCACCAAGGTAAAAGCACGGTATTTGATCAACTTTTTGCATGGCAGACCG
CCGAAACGGCAAAATTGTCGGAACAGGCGTAA

Upstream 100 bases:

>100_bases
CCAAGCGCCAATAATCAAAAAGAAAATTCGGATCACCATTTCCGGATTTTTTATTTTTGCAGTGATGACACGCTTTCTAC
AGCACGACAGGAGGGTTCTT

Downstream 100 bases:

>100_bases
CGATACGTTTTCACTGTAAATGAAAGAAACTTGACGCTATCTGTTTACAAAGTGAAATTGACCATGTATACTCATTGCTG
GAATTCATTTCCAGCGTAGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MAKMVSLPDNEKRHFDIGEQALQKGNYASAAAHFEKAYEADQSYAIAQPLAASLNGLKQFHESLNVMLPHYQAFMQTDAD
VQLMLDAWLGTLNFVMARGMLRHFDAVRRATFDRQIDAAEALALSSHGEQIASLVRKISHLGGFSRQEQQDLFSQIGILP
KAALVEAAVPNLADQTVPVAMRVSLLDLLTSISYNQPVRYQAYDRIETLVPNELPGMAEEKSGPAILTQLQAALGDDDQE
LGTALVQMARVQIAFLYPDIDRLIPDPAAFVQAYLDHHQGKSTVFDQLFAWQTAETAKLSEQA

Sequences:

>Translated_303_residues
MAKMVSLPDNEKRHFDIGEQALQKGNYASAAAHFEKAYEADQSYAIAQPLAASLNGLKQFHESLNVMLPHYQAFMQTDAD
VQLMLDAWLGTLNFVMARGMLRHFDAVRRATFDRQIDAAEALALSSHGEQIASLVRKISHLGGFSRQEQQDLFSQIGILP
KAALVEAAVPNLADQTVPVAMRVSLLDLLTSISYNQPVRYQAYDRIETLVPNELPGMAEEKSGPAILTQLQAALGDDDQE
LGTALVQMARVQIAFLYPDIDRLIPDPAAFVQAYLDHHQGKSTVFDQLFAWQTAETAKLSEQA
>Mature_302_residues
AKMVSLPDNEKRHFDIGEQALQKGNYASAAAHFEKAYEADQSYAIAQPLAASLNGLKQFHESLNVMLPHYQAFMQTDADV
QLMLDAWLGTLNFVMARGMLRHFDAVRRATFDRQIDAAEALALSSHGEQIASLVRKISHLGGFSRQEQQDLFSQIGILPK
AALVEAAVPNLADQTVPVAMRVSLLDLLTSISYNQPVRYQAYDRIETLVPNELPGMAEEKSGPAILTQLQAALGDDDQEL
GTALVQMARVQIAFLYPDIDRLIPDPAAFVQAYLDHHQGKSTVFDQLFAWQTAETAKLSEQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33497; Mature: 33366

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKMVSLPDNEKRHFDIGEQALQKGNYASAAAHFEKAYEADQSYAIAQPLAASLNGLKQF
CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HESLNVMLPHYQAFMQTDADVQLMLDAWLGTLNFVMARGMLRHFDAVRRATFDRQIDAAE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALSSHGEQIASLVRKISHLGGFSRQEQQDLFSQIGILPKAALVEAAVPNLADQTVPVA
HHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHH
MRVSLLDLLTSISYNQPVRYQAYDRIETLVPNELPGMAEEKSGPAILTQLQAALGDDDQE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
LGTALVQMARVQIAFLYPDIDRLIPDPAAFVQAYLDHHQGKSTVFDQLFAWQTAETAKLS
HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHC
EQA
CCC
>Mature Secondary Structure 
AKMVSLPDNEKRHFDIGEQALQKGNYASAAAHFEKAYEADQSYAIAQPLAASLNGLKQF
CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA