| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is coaD
Identifier: 116494807
GI number: 116494807
Start: 1304057
End: 1304560
Strand: Direct
Name: coaD
Synonym: LSEI_1318
Alternate gene names: 116494807
Gene position: 1304057-1304560 (Clockwise)
Preceding gene: 116494806
Following gene: 116494808
Centisome position: 45.04
GC content: 46.83
Gene sequence:
>504_bases ATGACTAAAAAAATTGCAGTGTTTCCCGGTAGTTTTGATCCTTTCACGAACGGTCATCTTGATACCGTCAAAAGAGCTAG TCGGTTGTTTGATGAAGTGGTTGTAGCAGCCATGACCAACACGAGCAAAAAGCCGCTTTTTTCCAGTGAAGAGAAATTGG CGCTGATCAGTGAAAGCACCGCTGGGCTACCAAATGTTAAAGCCATGGCAGCGCCTAAACGATTAACAGTTGAATTTGCC CGGTCAATCGGTGCCCAGTTTATGATTCGTGGTATCCGCAATGTCGCGGACTTTGGTTACGAGGCTGATATTGCGACGGT GAATCATGATCTCGATCCTGAAATCGAAACAGTTTTCTTGCTGGCAGACAAGCAATATGATGCCTTATCCAGTACCATCA TCAAAGAGGTCGCGGCCTTTGGCGGTGACGTTCATCGTTTTGTGCCTGCGCCTGTCGAAGCAGCTTTGTATGCGAAACTA GGTGACGCTCATCAAACCAAGTAA
Upstream 100 bases:
>100_bases GATGTGACTTATCCTGATGAGATCCCCGGCTACATCAAGCTACGGCGCCAAACCTATGGGGTGGCGCAGGTCTTAATTTT AGAGCGAAGCGAGGAAAACA
Downstream 100 bases:
>100_bases TCAGAAACGTCGGCGCTGGCGTTGGCTTATCGGACTGTTAATAGCAGTCGTTTTGTTGGCTGTCTTCTTTTTGATCCCAA CCAATTACTATCTAGAAGCG
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTKKIAVFPGSFDPFTNGHLDTVKRASRLFDEVVVAAMTNTSKKPLFSSEEKLALISESTAGLPNVKAMAAPKRLTVEFA RSIGAQFMIRGIRNVADFGYEADIATVNHDLDPEIETVFLLADKQYDALSSTIIKEVAAFGGDVHRFVPAPVEAALYAKL GDAHQTK
Sequences:
>Translated_167_residues MTKKIAVFPGSFDPFTNGHLDTVKRASRLFDEVVVAAMTNTSKKPLFSSEEKLALISESTAGLPNVKAMAAPKRLTVEFA RSIGAQFMIRGIRNVADFGYEADIATVNHDLDPEIETVFLLADKQYDALSSTIIKEVAAFGGDVHRFVPAPVEAALYAKL GDAHQTK >Mature_166_residues TKKIAVFPGSFDPFTNGHLDTVKRASRLFDEVVVAAMTNTSKKPLFSSEEKLALISESTAGLPNVKAMAAPKRLTVEFAR SIGAQFMIRGIRNVADFGYEADIATVNHDLDPEIETVFLLADKQYDALSSTIIKEVAAFGGDVHRFVPAPVEAALYAKLG DAHQTK
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=159, Percent_Identity=47.1698113207547, Blast_Score=153, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_LACC3 (Q039M3)
Other databases:
- EMBL: CP000423 - RefSeq: YP_806541.1 - ProteinModelPortal: Q039M3 - SMR: Q039M3 - STRING: Q039M3 - GeneID: 4419679 - GenomeReviews: CP000423_GR - KEGG: lca:LSEI_1318 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - PhylomeDB: Q039M3 - ProtClustDB: PRK00168 - BioCyc: LCAS321967:LSEI_1318-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 18129; Mature: 17998
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKIAVFPGSFDPFTNGHLDTVKRASRLFDEVVVAAMTNTSKKPLFSSEEKLALISEST CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC AGLPNVKAMAAPKRLTVEFARSIGAQFMIRGIRNVADFGYEADIATVNHDLDPEIETVFL CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEE LADKQYDALSSTIIKEVAAFGGDVHRFVPAPVEAALYAKLGDAHQTK EECCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TKKIAVFPGSFDPFTNGHLDTVKRASRLFDEVVVAAMTNTSKKPLFSSEEKLALISEST CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC AGLPNVKAMAAPKRLTVEFARSIGAQFMIRGIRNVADFGYEADIATVNHDLDPEIETVFL CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEE LADKQYDALSSTIIKEVAAFGGDVHRFVPAPVEAALYAKLGDAHQTK EECCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA