| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is mreB [H]
Identifier: 116494747
GI number: 116494747
Start: 1234852
End: 1235853
Strand: Direct
Name: mreB [H]
Synonym: LSEI_1255
Alternate gene names: 116494747
Gene position: 1234852-1235853 (Clockwise)
Preceding gene: 116494746
Following gene: 116494748
Centisome position: 42.65
GC content: 47.8
Gene sequence:
>1002_bases TTGTTTGGATTTGGATCAAAAAATATCGGGATCGATCTTGGCACTGCAAATACCTTGGTTTACGTTGACGGTAAAGGCAT CGTTTTAAACGAACCTTCCGTTGTCGCGAAGAATACCCAAACGGAAGAAGTCATTGCGGTTGGTGAAGAAGCTCGCGACA TGATCGGTCGTACCCCGACCAATATCGTGGCGATCCGCCCAATGAAAGATGGGGTCATCGCTGACTACGATACAACGGCA GCCATGTTGAAATACTTCATGCAAAAGGCGCTCGGCAACGGTAGCCATCCGCAGGTCATGATTTGTGTGCCTAGCGGTGT GACCGAAGTTGAAAAACGCGCCGTGATTGATGCGGCTAAAGTTGCTGGTGCACGCGATGCATTCGTCATTGAGGAACCTT ATGCTGCTGCGATCGGTGCTGGCTTGCCAGTTATGGATCCTACCGGCAGCATGGTTGTTGATATTGGCGGCGGCACGACT GACGTGGCGACCATCTCACTTGGCGGTATCGTGTCCAGTCGTTCTATTCGAGTGGCCGGTGACAAGTTTGATGAAGCGAT CATCAATCACTTACGGCAGAATTTCAACCTGTTAATCGGTGAGCGAACAGCTGAAGCCATGAAGATTCAGATTGGCTCAG CATCTGTTGAAAAGGCAAAAGATATTGACGGCATGACGGTTCGCGGTCGTGATTTGTTGAGTGGTTTACCGAAGACAATC GAAATTTCAGCGACTGACATTGCCAGTGCCATTCATGAAAATGTTCTTGATATCATTACAGCAATTAAAGAGACGCTTGA AGAAACTTCTCCAGAAATTGCTGCCGATGTCATTGATCATGGGATTGTTTTAACAGGTGGCGGTGCCTTATTGAAGCACT TGCCGGATGTCATTTCGGATGAAACCAAGGTACCGGTCTTCATTGCCCAAGATCCATTGGATTGTGTTGCCATCGGTACT GGCGAGTCATTGAAGAATATTGATGTCCTAAAGAAGCGTTAA
Upstream 100 bases:
>100_bases TCTGGCATGAAAATCGGGTAGTTTCACATTTTGTCACAGAAATAAATATGCTATAATGCATGGAGTTATACGAAATGAGT CAGCATAAGGGGAGAACGTC
Downstream 100 bases:
>100_bases CAGCCCATAAATGAAGATGGTTCGTGTGTGGCAAGAGGCTGGGATGATTTGATCCTGGCCTTTTTTCGCGAGTATGACGG AGGAACCAATGCAGAAATTC
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MFGFGSKNIGIDLGTANTLVYVDGKGIVLNEPSVVAKNTQTEEVIAVGEEARDMIGRTPTNIVAIRPMKDGVIADYDTTA AMLKYFMQKALGNGSHPQVMICVPSGVTEVEKRAVIDAAKVAGARDAFVIEEPYAAAIGAGLPVMDPTGSMVVDIGGGTT DVATISLGGIVSSRSIRVAGDKFDEAIINHLRQNFNLLIGERTAEAMKIQIGSASVEKAKDIDGMTVRGRDLLSGLPKTI EISATDIASAIHENVLDIITAIKETLEETSPEIAADVIDHGIVLTGGGALLKHLPDVISDETKVPVFIAQDPLDCVAIGT GESLKNIDVLKKR
Sequences:
>Translated_333_residues MFGFGSKNIGIDLGTANTLVYVDGKGIVLNEPSVVAKNTQTEEVIAVGEEARDMIGRTPTNIVAIRPMKDGVIADYDTTA AMLKYFMQKALGNGSHPQVMICVPSGVTEVEKRAVIDAAKVAGARDAFVIEEPYAAAIGAGLPVMDPTGSMVVDIGGGTT DVATISLGGIVSSRSIRVAGDKFDEAIINHLRQNFNLLIGERTAEAMKIQIGSASVEKAKDIDGMTVRGRDLLSGLPKTI EISATDIASAIHENVLDIITAIKETLEETSPEIAADVIDHGIVLTGGGALLKHLPDVISDETKVPVFIAQDPLDCVAIGT GESLKNIDVLKKR >Mature_333_residues MFGFGSKNIGIDLGTANTLVYVDGKGIVLNEPSVVAKNTQTEEVIAVGEEARDMIGRTPTNIVAIRPMKDGVIADYDTTA AMLKYFMQKALGNGSHPQVMICVPSGVTEVEKRAVIDAAKVAGARDAFVIEEPYAAAIGAGLPVMDPTGSMVVDIGGGTT DVATISLGGIVSSRSIRVAGDKFDEAIINHLRQNFNLLIGERTAEAMKIQIGSASVEKAKDIDGMTVRGRDLLSGLPKTI EISATDIASAIHENVLDIITAIKETLEETSPEIAADVIDHGIVLTGGGALLKHLPDVISDETKVPVFIAQDPLDCVAIGT GESLKNIDVLKKR
Specific function: Involved in formation of the rod shape of the cell [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI87082236, Length=334, Percent_Identity=52.6946107784431, Blast_Score=346, Evalue=1e-96, Organism=Caenorhabditis elegans, GI17507981, Length=376, Percent_Identity=25.531914893617, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 35002; Mature: 35002
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGFGSKNIGIDLGTANTLVYVDGKGIVLNEPSVVAKNTQTEEVIAVGEEARDMIGRTPT CCCCCCCCCEEEECCCCEEEEECCCEEEECCCCEEECCCCCHHHEEECHHHHHHHCCCCC NIVAIRPMKDGVIADYDTTAAMLKYFMQKALGNGSHPQVMICVPSGVTEVEKRAVIDAAK CEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH VAGARDAFVIEEPYAAAIGAGLPVMDPTGSMVVDIGGGTTDVATISLGGIVSSRSIRVAG HCCCCCEEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCEECCCEEEECC DKFDEAIINHLRQNFNLLIGERTAEAMKIQIGSASVEKAKDIDGMTVRGRDLLSGLPKTI CHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCHHHHHCCCCEEECCHHHHHCCCCEE EISATDIASAIHENVLDIITAIKETLEETSPEIAADVIDHGIVLTGGGALLKHLPDVISD EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCHHHHHHHHHHHCC ETKVPVFIAQDPLDCVAIGTGESLKNIDVLKKR CCCCEEEEECCCCCEEEECCCCCCCCCHHHCCC >Mature Secondary Structure MFGFGSKNIGIDLGTANTLVYVDGKGIVLNEPSVVAKNTQTEEVIAVGEEARDMIGRTPT CCCCCCCCCEEEECCCCEEEEECCCEEEECCCCEEECCCCCHHHEEECHHHHHHHCCCCC NIVAIRPMKDGVIADYDTTAAMLKYFMQKALGNGSHPQVMICVPSGVTEVEKRAVIDAAK CEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH VAGARDAFVIEEPYAAAIGAGLPVMDPTGSMVVDIGGGTTDVATISLGGIVSSRSIRVAG HCCCCCEEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCEECCCEEEECC DKFDEAIINHLRQNFNLLIGERTAEAMKIQIGSASVEKAKDIDGMTVRGRDLLSGLPKTI CHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCHHHHHCCCCEEECCHHHHHCCCCEE EISATDIASAIHENVLDIITAIKETLEETSPEIAADVIDHGIVLTGGGALLKHLPDVISD EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCHHHHHHHHHHHCC ETKVPVFIAQDPLDCVAIGTGESLKNIDVLKKR CCCCEEEEECCCCCEEEECCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377; 8387996 [H]