| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494713
Identifier: 116494713
GI number: 116494713
Start: 1198369
End: 1198608
Strand: Direct
Name: 116494713
Synonym: LSEI_1219
Alternate gene names: NA
Gene position: 1198369-1198608 (Clockwise)
Preceding gene: 116494712
Following gene: 116494714
Centisome position: 41.39
GC content: 42.92
Gene sequence:
>240_bases ATGGGCATTAAGAAACACTTTCATCATCAAGGGATTGGCCATCAGCTGGTAAAGGCATTAGAAGCCGACGCTAAACAACA TGCCCACTACCTGCAGGTAAAAACGTTTGATGAAGGTCATTATCCTGAATATGATCAAACCATCCGTTTTTACGAGTCAG TGGGATTTGAGCGATTGGAAGTTTTCCCGACATTATGGGATGCTTGGAATCCGTGTTTGGTGTTGGTCAAGAAGCTTTAA
Upstream 100 bases:
>100_bases AGCAGTGAGCAAGCCTCTTTCTAGGTGGTAACTTTATTATTGCAATCTAGGGTTTATCGATTATCGCCAAACCAGCAAGG CAAGCGGCGAAATCAGTTGT
Downstream 100 bases:
>100_bases TAAGCGGCCAAATCGCCCAGAACAAAATCAATAAAAATCGCCATGCCTGACAGAACAGATCGGCTCGTGTAAACTTGATA TGCGTAAGCGCATTCAAAAC
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MGIKKHFHHQGIGHQLVKALEADAKQHAHYLQVKTFDEGHYPEYDQTIRFYESVGFERLEVFPTLWDAWNPCLVLVKKL
Sequences:
>Translated_79_residues MGIKKHFHHQGIGHQLVKALEADAKQHAHYLQVKTFDEGHYPEYDQTIRFYESVGFERLEVFPTLWDAWNPCLVLVKKL >Mature_78_residues GIKKHFHHQGIGHQLVKALEADAKQHAHYLQVKTFDEGHYPEYDQTIRFYESVGFERLEVFPTLWDAWNPCLVLVKKL
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9335; Mature: 9204
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKKHFHHQGIGHQLVKALEADAKQHAHYLQVKTFDEGHYPEYDQTIRFYESVGFERLE CCCCHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCHHHHH VFPTLWDAWNPCLVLVKKL HHHHHHCCCCHHHHHHCCC >Mature Secondary Structure GIKKHFHHQGIGHQLVKALEADAKQHAHYLQVKTFDEGHYPEYDQTIRFYESVGFERLE CCCHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCHHHHH VFPTLWDAWNPCLVLVKKL HHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA