| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494681
Identifier: 116494681
GI number: 116494681
Start: 1168951
End: 1169133
Strand: Direct
Name: 116494681
Synonym: LSEI_1186
Alternate gene names: NA
Gene position: 1168951-1169133 (Clockwise)
Preceding gene: 116494679
Following gene: 116494682
Centisome position: 40.37
GC content: 41.53
Gene sequence:
>183_bases ATGGATAACTATGATAAAGCAAGAAAGGTTTTGCAATCAACGGCATTGTCAAAAATAGCTCAGCAGACCGGTATCAGTAT CGGGCAGATTTGGCATTATCGTGATCGTCACGAAGGCATTGAAAAGGCACCAGAGGCCTATGTAAAGAAGATTGCCAGTT TGTATCGAAATAAGCGGTATTGA
Upstream 100 bases:
>100_bases GGGAAATTATATACATTTATTTTACAACAAAAGTGGGACGAAGGGTATTGATTCATAGTGTTAAGAATTATTAATCACTC ACTAATTTAGGAGGCCGCAA
Downstream 100 bases:
>100_bases AATCGCTAGAATAAGGGGCTTGTTAATTTGGCCAAATTGCAAGAAGCGTCAGGATAAAAGCTATGAACCCCCAAAACAAG TCGTGATCCTGATAGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY
Sequences:
>Translated_60_residues MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY >Mature_60_residues MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7039; Mature: 7039
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA