Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494681

Identifier: 116494681

GI number: 116494681

Start: 1168951

End: 1169133

Strand: Direct

Name: 116494681

Synonym: LSEI_1186

Alternate gene names: NA

Gene position: 1168951-1169133 (Clockwise)

Preceding gene: 116494679

Following gene: 116494682

Centisome position: 40.37

GC content: 41.53

Gene sequence:

>183_bases
ATGGATAACTATGATAAAGCAAGAAAGGTTTTGCAATCAACGGCATTGTCAAAAATAGCTCAGCAGACCGGTATCAGTAT
CGGGCAGATTTGGCATTATCGTGATCGTCACGAAGGCATTGAAAAGGCACCAGAGGCCTATGTAAAGAAGATTGCCAGTT
TGTATCGAAATAAGCGGTATTGA

Upstream 100 bases:

>100_bases
GGGAAATTATATACATTTATTTTACAACAAAAGTGGGACGAAGGGTATTGATTCATAGTGTTAAGAATTATTAATCACTC
ACTAATTTAGGAGGCCGCAA

Downstream 100 bases:

>100_bases
AATCGCTAGAATAAGGGGCTTGTTAATTTGGCCAAATTGCAAGAAGCGTCAGGATAAAAGCTATGAACCCCCAAAACAAG
TCGTGATCCTGATAGCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY

Sequences:

>Translated_60_residues
MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY
>Mature_60_residues
MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7039; Mature: 7039

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDNYDKARKVLQSTALSKIAQQTGISIGQIWHYRDRHEGIEKAPEAYVKKIASLYRNKRY
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA