Click here to switch to the map view.

The map label for this gene is 116494623

Identifier: 116494623

GI number: 116494623

Start: 1110525

End: 1111130

Strand: Direct

Name: 116494623

Synonym: LSEI_1124

Alternate gene names: NA

Gene position: 1110525-1111130 (Clockwise)

Preceding gene: 116494619

Following gene: 116494624

Centisome position: 38.36

GC content: 42.08

Gene sequence:

>606_bases
ATGCTGTTTTTGGGGCCATTTTACAACTGGATTAATACAACCTCGCTCAGTCGCGTCAACCATTTTCCTTTGATTCGATT
GATTGTTTTTAGTTTGGACAAAACTATTCTATACCTATTGATCTTTGCAGCCTTGCGCTGCCTTTGGCTGTTGGTGACGA
AGCGAAGAACCACTTTTGGGCGGGAATTAAAACTAGGCATTTTTGTCGGTTATTTAATGCTTTTATTTGCTTTGACAGTT
TTTCGCGATGTGTATTATCCGTGGCAACTGCACTTTCATTGGAATCGGCCATTATCTGTGATTAATATCCGACCACTTGT
TGAAACGCTCAAATTGCAACATTCTGCCAGTCACTTCGATCTCTGGTATCAATCACTAGGGAATATTGCTTGGTTTATGC
CGCTTGGCTTTGGTATTCCTTGGGTGAGCAAACATCGACGGCGTCTCGCGGGCACGGTTATGTTTGGCCTGCTGACGTCG
TTAAGTATTGAAACCTTACAATTTCTGCTAATCAGTGGGGTAGCGGACATTGATGATGTTATTTTCAATGTGATCGGTGC
GATTTTCGGCTATAGCCTATATCGCTTGTTTCATCATCGTAAATAA

Upstream 100 bases:

>100_bases
AGAGGGTGATGCTCATCATTCTTACAGAGTCTTTAAAAGTTGTAACACATTGTGGGTATCCTTCAGTCACTTTGCTACAA
TGACAACTGGAGGTAGCACA

Downstream 100 bases:

>100_bases
GCATGAGTCGTTTTAGTATTCATCATGAGTTTTCTGTGTATCATGAAGGTGAGCTGTCTCTTGGAAATGCTTTAGATCAG
GTTGTGCTTGTCTTGCCGTG

Product: glycopeptide antibiotics resistance protein

Products: NA

Alternate protein names: VanZ Family Protein; VanZ Protein; Teicoplanin Resistance Protein VanZ; Integral Membrane Protein; ABC-2 Type Transport System Permease Protein

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLFLGPFYNWINTTSLSRVNHFPLIRLIVFSLDKTILYLLIFAALRCLWLLVTKRRTTFGRELKLGIFVGYLMLLFALTV
FRDVYYPWQLHFHWNRPLSVINIRPLVETLKLQHSASHFDLWYQSLGNIAWFMPLGFGIPWVSKHRRRLAGTVMFGLLTS
LSIETLQFLLISGVADIDDVIFNVIGAIFGYSLYRLFHHRK

Sequences:

>Translated_201_residues
MLFLGPFYNWINTTSLSRVNHFPLIRLIVFSLDKTILYLLIFAALRCLWLLVTKRRTTFGRELKLGIFVGYLMLLFALTV
FRDVYYPWQLHFHWNRPLSVINIRPLVETLKLQHSASHFDLWYQSLGNIAWFMPLGFGIPWVSKHRRRLAGTVMFGLLTS
LSIETLQFLLISGVADIDDVIFNVIGAIFGYSLYRLFHHRK
>Mature_201_residues
MLFLGPFYNWINTTSLSRVNHFPLIRLIVFSLDKTILYLLIFAALRCLWLLVTKRRTTFGRELKLGIFVGYLMLLFALTV
FRDVYYPWQLHFHWNRPLSVINIRPLVETLKLQHSASHFDLWYQSLGNIAWFMPLGFGIPWVSKHRRRLAGTVMFGLLTS
LSIETLQFLLISGVADIDDVIFNVIGAIFGYSLYRLFHHRK

Specific function: Unknown

COG id: COG4767

COG function: function code V; Glycopeptide antibiotics resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23609; Mature: 23609

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLGPFYNWINTTSLSRVNHFPLIRLIVFSLDKTILYLLIFAALRCLWLLVTKRRTTFG
CEEECCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RELKLGIFVGYLMLLFALTVFRDVYYPWQLHFHWNRPLSVINIRPLVETLKLQHSASHFD
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEHHHHHHHHHHHHCCHHHH
LWYQSLGNIAWFMPLGFGIPWVSKHRRRLAGTVMFGLLTSLSIETLQFLLISGVADIDDV
HHHHHHCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IFNVIGAIFGYSLYRLFHHRK
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFLGPFYNWINTTSLSRVNHFPLIRLIVFSLDKTILYLLIFAALRCLWLLVTKRRTTFG
CEEECCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RELKLGIFVGYLMLLFALTVFRDVYYPWQLHFHWNRPLSVINIRPLVETLKLQHSASHFD
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEHHHHHHHHHHHHCCHHHH
LWYQSLGNIAWFMPLGFGIPWVSKHRRRLAGTVMFGLLTSLSIETLQFLLISGVADIDDV
HHHHHHCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IFNVIGAIFGYSLYRLFHHRK
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA