| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494614
Identifier: 116494614
GI number: 116494614
Start: 1100549
End: 1101031
Strand: Direct
Name: 116494614
Synonym: LSEI_1115
Alternate gene names: NA
Gene position: 1100549-1101031 (Clockwise)
Preceding gene: 116494613
Following gene: 116494615
Centisome position: 38.01
GC content: 50.31
Gene sequence:
>483_bases ATGTTAAGATTTGTGAAAGTTGCGCCGGAAGCTCGGTTGCATTATTTGGATCTTTTATTGATTGGGGATGAGGATCCGAA TATGTTGCGGCGGTATTTGGACGCTGGCACGTTATTTGCAGCGATTGACGAGACTGTGCCGGTTGGCGTGGCCATGGTAG TGCCTGTGGATGCTACCACCATTGAACTGAAGAATCTTGCGGTACTGCCTGCCCGCCGTCGCCAAGGTATCGGCGCGAGC TTGTTACGGCACGTCGGACTGGTGTATGCGCCTGAGTATCAGGATATGCTGGTTGGTACTGGTGATGTGGATTTCGAGAA TCTGCGTTTTTACATGCGCCAGGGATTCCGGTTTGACGCGATCCGTAAGCATTTCTTCGATCAGTATGCCCATCCGCTGT ATGCAGAAGGGATGCAGTTGCAGGACATGGTTGTGTTACGACGACGGTTGTTATTGACAGGTTCTGATAAAACAAAGGAG TAA
Upstream 100 bases:
>100_bases CTAAAACTCATTTGGCAGGTGCTCAATGCGTGTAAGTGCATGTTAAACTAGTTCATAGCATGTTAATTGAAACATTTTTT GGAAGGTGGGGAAGGGCTGC
Downstream 100 bases:
>100_bases TGCTTTTGGCCAAAAGGCGCCGACATTTTACGTTAAAAATAATTCCGCTTGCTGCTTGGCTAGTCATCGGTTTCTTTGCG ATCGGTGTGACGCTTGTGGT
Product: acetyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLRFVKVAPEARLHYLDLLLIGDEDPNMLRRYLDAGTLFAAIDETVPVGVAMVVPVDATTIELKNLAVLPARRRQGIGAS LLRHVGLVYAPEYQDMLVGTGDVDFENLRFYMRQGFRFDAIRKHFFDQYAHPLYAEGMQLQDMVVLRRRLLLTGSDKTKE
Sequences:
>Translated_160_residues MLRFVKVAPEARLHYLDLLLIGDEDPNMLRRYLDAGTLFAAIDETVPVGVAMVVPVDATTIELKNLAVLPARRRQGIGAS LLRHVGLVYAPEYQDMLVGTGDVDFENLRFYMRQGFRFDAIRKHFFDQYAHPLYAEGMQLQDMVVLRRRLLLTGSDKTKE >Mature_160_residues MLRFVKVAPEARLHYLDLLLIGDEDPNMLRRYLDAGTLFAAIDETVPVGVAMVVPVDATTIELKNLAVLPARRRQGIGAS LLRHVGLVYAPEYQDMLVGTGDVDFENLRFYMRQGFRFDAIRKHFFDQYAHPLYAEGMQLQDMVVLRRRLLLTGSDKTKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18269; Mature: 18269
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFVKVAPEARLHYLDLLLIGDEDPNMLRRYLDAGTLFAAIDETVPVGVAMVVPVDATT CCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHCCCHHEEHHCCCCCCCEEEEEECCCCE IELKNLAVLPARRRQGIGASLLRHVGLVYAPEYQDMLVGTGDVDFENLRFYMRQGFRFDA EEECCEEECCCHHHCCCCHHHHHHCCEEECCCCHHEEEECCCCCHHHHHHHHHCCCCHHH IRKHFFDQYAHPLYAEGMQLQDMVVLRRRLLLTGSDKTKE HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLRFVKVAPEARLHYLDLLLIGDEDPNMLRRYLDAGTLFAAIDETVPVGVAMVVPVDATT CCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHCCCHHEEHHCCCCCCCEEEEEECCCCE IELKNLAVLPARRRQGIGASLLRHVGLVYAPEYQDMLVGTGDVDFENLRFYMRQGFRFDA EEECCEEECCCHHHCCCCHHHHHHCCEEECCCCHHEEEECCCCCHHHHHHHHHCCCCHHH IRKHFFDQYAHPLYAEGMQLQDMVVLRRRLLLTGSDKTKE HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA