Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494586

Identifier: 116494586

GI number: 116494586

Start: 1069776

End: 1071149

Strand: Direct

Name: 116494586

Synonym: LSEI_1085

Alternate gene names: NA

Gene position: 1069776-1071149 (Clockwise)

Preceding gene: 116494585

Following gene: 116494587

Centisome position: 36.95

GC content: 46.65

Gene sequence:

>1374_bases
ATGGGAAGTTCATCAGACCTAAAAGACCTATTACGCGAACGAATCGCCGCTAAATATACCATTGACGATTTAAAAGATAC
CGGGAAAAAGATTCGTAAAACTGCACCAATTGAAAGTCTGGCCGCCGTCAGTAAGATTGATCGGGACCCCGTCCAGTTCA
TTAATAGTGTCGAACAAAACTTAACCAAATCACTGCTGCCTATGCGTCATAGTCGCATGGGCGCTTCACAGGCAGCTTTT
TTTCGCGGCACTGCTGAGTTGATGGCCTATGACTTGCAGCAAGGGGAGAAGTCTGGCATCAATCTGTTAATTGATGGTGA
CGCCCACTTACAGAATTTCGGTTTCTACGCATCGCCAGAACGCAACCTGCTTTTTGACCTCAACGACTTCGATGAAGCGC
AGATCAACAGCTTTGAATTTGACATCAAGCGTTTGCTGACAAGTGTTTATTTGTTAGGCGACCAACAAGGCTTTGATGCA
GATAAATTAGATGAATTGGTACAGACTGATGCATCGATTTATCGTAAAACCTTACGGGATCTTTTCAAGGTTGGTGCATT
GGATCGTTTTTATCAGTCCACCGAAGTCAACCATCTTGTGCAGTCGATCCCCGGCGCTGAAGATTCGGCGTTGCTGTCGA
AATTTGTGAAAAAGGCGACGAAGCGTAATAATGACTCGGTGATCAAAAAATACACCACGACTATCGACGGTAACATGCGG
TTTAAAGACGATCCGCCAAGCTCTGTCAGGTTGGATAAAGCGACTTATCAGGCGATCTTTGACGGCTTTACCCAGTATCG
CAAGTCCACGCGGCCGGATATTTTGGTGCTACTGAGCGAATATCGGATTACGGACATCATTCATCACAGCGTGGGTATTG
GCAGCTTTGGCACGAATTGCTATCTCGTTTTGCTAAGCGGATTAGGTGGCAGCCATCTTGTGCTGCAAGTCAAAGAAGCC
TTGCCGCCGCGACCTGAATTAATTCCAAATACGGAACGCATCACGTTACAACAAGAAGTCAGTCAGGGACAGCGTATTAT
TGCTTCTCAGATGATTTTGCAGAAAGCCTCTGATCCATTCCTCGGCTGGTTTAACGTAGGCGATAAAAGCTATTATGTCC
GCCAGTTCCGTGATATGAAGGGGTCTGTGGATCTTGAGGAACTGACTTTCCCCGAGTTTCAGTACTACACCCAGATCACC
ACGTATCTATTGGCAATGGCACACGCTCAAACCCCTCAGGCTGCAGTGGTGACTGGCTATCTCGATAAAAGTTTTGACAG
CGCCGTTCAGCGTTGGAGTAAATGGTATTTGAATCAGGTAAAAGCGGATTATTCAGCCTTTATGCGGGCAGTTCAGACGC
ACATGCTGGCCTGA

Upstream 100 bases:

>100_bases
CCGAATCACTGGAAAACCATCTCACAATGCGCTACTTTAAAACTAACGATGTTGTCTACCGTCTCACAAGACAACACAGA
AAACCACAAGGGAGCTTATT

Downstream 100 bases:

>100_bases
GCCATCTTGGAACTGATTGACAGATCAGATTTTTCTTGTCCTGATGACGCTCACTCTGGCAAAATAAAGTTAAGACGCTA
ATCACCTAACTTAATGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MGSSSDLKDLLRERIAAKYTIDDLKDTGKKIRKTAPIESLAAVSKIDRDPVQFINSVEQNLTKSLLPMRHSRMGASQAAF
FRGTAELMAYDLQQGEKSGINLLIDGDAHLQNFGFYASPERNLLFDLNDFDEAQINSFEFDIKRLLTSVYLLGDQQGFDA
DKLDELVQTDASIYRKTLRDLFKVGALDRFYQSTEVNHLVQSIPGAEDSALLSKFVKKATKRNNDSVIKKYTTTIDGNMR
FKDDPPSSVRLDKATYQAIFDGFTQYRKSTRPDILVLLSEYRITDIIHHSVGIGSFGTNCYLVLLSGLGGSHLVLQVKEA
LPPRPELIPNTERITLQQEVSQGQRIIASQMILQKASDPFLGWFNVGDKSYYVRQFRDMKGSVDLEELTFPEFQYYTQIT
TYLLAMAHAQTPQAAVVTGYLDKSFDSAVQRWSKWYLNQVKADYSAFMRAVQTHMLA

Sequences:

>Translated_457_residues
MGSSSDLKDLLRERIAAKYTIDDLKDTGKKIRKTAPIESLAAVSKIDRDPVQFINSVEQNLTKSLLPMRHSRMGASQAAF
FRGTAELMAYDLQQGEKSGINLLIDGDAHLQNFGFYASPERNLLFDLNDFDEAQINSFEFDIKRLLTSVYLLGDQQGFDA
DKLDELVQTDASIYRKTLRDLFKVGALDRFYQSTEVNHLVQSIPGAEDSALLSKFVKKATKRNNDSVIKKYTTTIDGNMR
FKDDPPSSVRLDKATYQAIFDGFTQYRKSTRPDILVLLSEYRITDIIHHSVGIGSFGTNCYLVLLSGLGGSHLVLQVKEA
LPPRPELIPNTERITLQQEVSQGQRIIASQMILQKASDPFLGWFNVGDKSYYVRQFRDMKGSVDLEELTFPEFQYYTQIT
TYLLAMAHAQTPQAAVVTGYLDKSFDSAVQRWSKWYLNQVKADYSAFMRAVQTHMLA
>Mature_456_residues
GSSSDLKDLLRERIAAKYTIDDLKDTGKKIRKTAPIESLAAVSKIDRDPVQFINSVEQNLTKSLLPMRHSRMGASQAAFF
RGTAELMAYDLQQGEKSGINLLIDGDAHLQNFGFYASPERNLLFDLNDFDEAQINSFEFDIKRLLTSVYLLGDQQGFDAD
KLDELVQTDASIYRKTLRDLFKVGALDRFYQSTEVNHLVQSIPGAEDSALLSKFVKKATKRNNDSVIKKYTTTIDGNMRF
KDDPPSSVRLDKATYQAIFDGFTQYRKSTRPDILVLLSEYRITDIIHHSVGIGSFGTNCYLVLLSGLGGSHLVLQVKEAL
PPRPELIPNTERITLQQEVSQGQRIIASQMILQKASDPFLGWFNVGDKSYYVRQFRDMKGSVDLEELTFPEFQYYTQITT
YLLAMAHAQTPQAAVVTGYLDKSFDSAVQRWSKWYLNQVKADYSAFMRAVQTHMLA

Specific function: Unknown

COG id: COG4320

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51725; Mature: 51594

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSSDLKDLLRERIAAKYTIDDLKDTGKKIRKTAPIESLAAVSKIDRDPVQFINSVEQN
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHH
LTKSLLPMRHSRMGASQAAFFRGTAELMAYDLQQGEKSGINLLIDGDAHLQNFGFYASPE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCCCC
RNLLFDLNDFDEAQINSFEFDIKRLLTSVYLLGDQQGFDADKLDELVQTDASIYRKTLRD
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFKVGALDRFYQSTEVNHLVQSIPGAEDSALLSKFVKKATKRNNDSVIKKYTTTIDGNMR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCEE
FKDDPPSSVRLDKATYQAIFDGFTQYRKSTRPDILVLLSEYRITDIIHHSVGIGSFGTNC
ECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCE
YLVLLSGLGGSHLVLQVKEALPPRPELIPNTERITLQQEVSQGQRIIASQMILQKASDPF
EEEEEECCCCCCEEEEEHHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCC
LGWFNVGDKSYYVRQFRDMKGSVDLEELTFPEFQYYTQITTYLLAMAHAQTPQAAVVTGY
EEEEECCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHH
LDKSFDSAVQRWSKWYLNQVKADYSAFMRAVQTHMLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSSSDLKDLLRERIAAKYTIDDLKDTGKKIRKTAPIESLAAVSKIDRDPVQFINSVEQN
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHH
LTKSLLPMRHSRMGASQAAFFRGTAELMAYDLQQGEKSGINLLIDGDAHLQNFGFYASPE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCCCC
RNLLFDLNDFDEAQINSFEFDIKRLLTSVYLLGDQQGFDADKLDELVQTDASIYRKTLRD
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFKVGALDRFYQSTEVNHLVQSIPGAEDSALLSKFVKKATKRNNDSVIKKYTTTIDGNMR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCEE
FKDDPPSSVRLDKATYQAIFDGFTQYRKSTRPDILVLLSEYRITDIIHHSVGIGSFGTNC
ECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCE
YLVLLSGLGGSHLVLQVKEALPPRPELIPNTERITLQQEVSQGQRIIASQMILQKASDPF
EEEEEECCCCCCEEEEEHHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCC
LGWFNVGDKSYYVRQFRDMKGSVDLEELTFPEFQYYTQITTYLLAMAHAQTPQAAVVTGY
EEEEECCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHH
LDKSFDSAVQRWSKWYLNQVKADYSAFMRAVQTHMLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA