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The map label for this gene is gatC [H]

Identifier: 116494559

GI number: 116494559

Start: 1040550

End: 1040846

Strand: Direct

Name: gatC [H]

Synonym: LSEI_1057

Alternate gene names: 116494559

Gene position: 1040550-1040846 (Clockwise)

Preceding gene: 116494558

Following gene: 116494560

Centisome position: 35.94

GC content: 47.14

Gene sequence:

>297_bases
ATGATTTCTAAAGACAGTGTTGCGCATGTGGCAGGATTGGCCAAGTTGCAATTTTCTGAAACGGAACTGGAGAAATACAC
CAGCCAGCTCTCCGAGATTCTCGATATGGTTGAACAACTAGAAAGTGTTCCGACACAAGATGTGCCGGTAACTACTCAGA
GTATTCATCTGGAAAATGTGATGCGAGCGGATGTCGCTAAGCCAGGCGAACCGGTAGCGGACTTGTTGAAAAATGTGCCA
ACCAAGAAGGGCACGTTGATCCAAGTTCCAGCGATCATCGATAAAGAGGAGGACTAG

Upstream 100 bases:

>100_bases
AAGTTCTGGCGACAAAGGCTTTTATACCCATGTATTCGGGAGTTATTAGCCGAATCTATGGTAAACTACGAATGATAATG
AAACTGAAAGCGGGGATAGC

Downstream 100 bases:

>100_bases
CGCGTGGATTACTTTAAAACCAGTATCGATCAATTGCATGAGCAGTTACGCTCCGGCAAGGTGACCAGCAGTCAATTGGT
TGACGAGACATTGGCCGGCA

Product: Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase C subunit

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MISKDSVAHVAGLAKLQFSETELEKYTSQLSEILDMVEQLESVPTQDVPVTTQSIHLENVMRADVAKPGEPVADLLKNVP
TKKGTLIQVPAIIDKEED

Sequences:

>Translated_98_residues
MISKDSVAHVAGLAKLQFSETELEKYTSQLSEILDMVEQLESVPTQDVPVTTQSIHLENVMRADVAKPGEPVADLLKNVP
TKKGTLIQVPAIIDKEED
>Mature_98_residues
MISKDSVAHVAGLAKLQFSETELEKYTSQLSEILDMVEQLESVPTQDVPVTTQSIHLENVMRADVAKPGEPVADLLKNVP
TKKGTLIQVPAIIDKEED

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 10741; Mature: 10741

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKDSVAHVAGLAKLQFSETELEKYTSQLSEILDMVEQLESVPTQDVPVTTQSIHLENV
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MRADVAKPGEPVADLLKNVPTKKGTLIQVPAIIDKEED
HHHHCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MISKDSVAHVAGLAKLQFSETELEKYTSQLSEILDMVEQLESVPTQDVPVTTQSIHLENV
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MRADVAKPGEPVADLLKNVPTKKGTLIQVPAIIDKEED
HHHHCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA