Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494528

Identifier: 116494528

GI number: 116494528

Start: 1012425

End: 1012748

Strand: Direct

Name: 116494528

Synonym: LSEI_1025

Alternate gene names: NA

Gene position: 1012425-1012748 (Clockwise)

Preceding gene: 116494527

Following gene: 116494529

Centisome position: 34.97

GC content: 41.98

Gene sequence:

>324_bases
ATGCGACGCAAACGATTACGGGCTTTTACATTGATTGAAGTGATTGCAGCACTTGGGGTCATTATTTTATTGACGTTAGC
TTTGGTTTTGACAATCCAAGGGCAAATGAAACGTGTTGAAAGTCAGAATCTAAAAGCTACGGTGGCAACTGTGAATTCAC
AAATTGAAATGGCTTATAACGAGCCGGATGCTGACAAGAAATCACTTAAAACAATTCCTGATTTAGTTAGAGAAGGCGTG
ATTACCGATGCGCAGGCGAAGGACTTGGAAAAAGGCAAGGCAACGATGAGCGGTGACAATCCGCCGAAATTTAAAGTTCC
ATGA

Upstream 100 bases:

>100_bases
ACTTGGTGCAGCCATTGCTGTTTTTGCTTATTGGTGGCGAAATTTTACTGGTTTATTTGCAAATTCTCTTACCACTCTAT
CAATCTTTCGGGGGATGACC

Downstream 100 bases:

>100_bases
AACGGCTGCGTGGCTTTGTGATGCTTGAAGTGGTGGCGGTCTTGGTTGTGCTGGCAGGATTGACACTGGCGGCCGTTCCC
TTGGGGCAAAGCGTGATTCG

Product: competence protein ComGC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRRKRLRAFTLIEVIAALGVIILLTLALVLTIQGQMKRVESQNLKATVATVNSQIEMAYNEPDADKKSLKTIPDLVREGV
ITDAQAKDLEKGKATMSGDNPPKFKVP

Sequences:

>Translated_107_residues
MRRKRLRAFTLIEVIAALGVIILLTLALVLTIQGQMKRVESQNLKATVATVNSQIEMAYNEPDADKKSLKTIPDLVREGV
ITDAQAKDLEKGKATMSGDNPPKFKVP
>Mature_107_residues
MRRKRLRAFTLIEVIAALGVIILLTLALVLTIQGQMKRVESQNLKATVATVNSQIEMAYNEPDADKKSLKTIPDLVREGV
ITDAQAKDLEKGKATMSGDNPPKFKVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11775; Mature: 11775

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKRLRAFTLIEVIAALGVIILLTLALVLTIQGQMKRVESQNLKATVATVNSQIEMAYN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHEEEEC
EPDADKKSLKTIPDLVREGVITDAQAKDLEKGKATMSGDNPPKFKVP
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRKRLRAFTLIEVIAALGVIILLTLALVLTIQGQMKRVESQNLKATVATVNSQIEMAYN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHEEEEC
EPDADKKSLKTIPDLVREGVITDAQAKDLEKGKATMSGDNPPKFKVP
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA