| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494514
Identifier: 116494514
GI number: 116494514
Start: 995274
End: 995468
Strand: Direct
Name: 116494514
Synonym: LSEI_1010
Alternate gene names: NA
Gene position: 995274-995468 (Clockwise)
Preceding gene: 116494513
Following gene: 116494520
Centisome position: 34.38
GC content: 45.64
Gene sequence:
>195_bases TTGGGAAAGAGAACTTACAAAAATGAAGAGCGCTGGGTAGACGTTGTTTGTTGCCTTAGTCTTTGGTTGGCATCTTTTAG TTTGATGGCAGCCGCTACGGTACTCGATGTCAATCGTCCATTCTTCATTATTATGCTGTCATTAACGGCCTGCGCCATTG GCGAAACGGTGACGTTGGTTAGGAAAAAGCGCTGA
Upstream 100 bases:
>100_bases ATCTGATTGTGCCCCAGCGTCATTAACTGACAAAGGGATAAACGGTTTTGCAGTCGTCTTGGTTACTTGTTTCAGATACG ATCACTAAGAGGTGGGCAGC
Downstream 100 bases:
>100_bases CGCGGATGATAAGATTGTTTAATGCTATCACGCGTCACGGTAAAATGGGCCAGTATTAGCTGTGTCTTTTCAGTGATTAT TTTTGTGACTAATCAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MGKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLVRKKR
Sequences:
>Translated_64_residues MGKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLVRKKR >Mature_63_residues GKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLVRKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7268; Mature: 7137
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHEE RKKR ECCC >Mature Secondary Structure GKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHEE RKKR ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA