Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is 116494514

Identifier: 116494514

GI number: 116494514

Start: 995274

End: 995468

Strand: Direct

Name: 116494514

Synonym: LSEI_1010

Alternate gene names: NA

Gene position: 995274-995468 (Clockwise)

Preceding gene: 116494513

Following gene: 116494520

Centisome position: 34.38

GC content: 45.64

Gene sequence:

>195_bases
TTGGGAAAGAGAACTTACAAAAATGAAGAGCGCTGGGTAGACGTTGTTTGTTGCCTTAGTCTTTGGTTGGCATCTTTTAG
TTTGATGGCAGCCGCTACGGTACTCGATGTCAATCGTCCATTCTTCATTATTATGCTGTCATTAACGGCCTGCGCCATTG
GCGAAACGGTGACGTTGGTTAGGAAAAAGCGCTGA

Upstream 100 bases:

>100_bases
ATCTGATTGTGCCCCAGCGTCATTAACTGACAAAGGGATAAACGGTTTTGCAGTCGTCTTGGTTACTTGTTTCAGATACG
ATCACTAAGAGGTGGGCAGC

Downstream 100 bases:

>100_bases
CGCGGATGATAAGATTGTTTAATGCTATCACGCGTCACGGTAAAATGGGCCAGTATTAGCTGTGTCTTTTCAGTGATTAT
TTTTGTGACTAATCAACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MGKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLVRKKR

Sequences:

>Translated_64_residues
MGKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLVRKKR
>Mature_63_residues
GKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLVRKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7268; Mature: 7137

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHEE
RKKR
ECCC
>Mature Secondary Structure 
GKRTYKNEERWVDVVCCLSLWLASFSLMAAATVLDVNRPFFIIMLSLTACAIGETVTLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHEE
RKKR
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA