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The map label for this gene is ydiB [H]

Identifier: 116494501

GI number: 116494501

Start: 982377

End: 982838

Strand: Direct

Name: ydiB [H]

Synonym: LSEI_0997

Alternate gene names: 116494501

Gene position: 982377-982838 (Clockwise)

Preceding gene: 116494500

Following gene: 116494502

Centisome position: 33.93

GC content: 46.97

Gene sequence:

>462_bases
ATGACAAGTTTGAAAAAAGACTTCACTAGTGAGGCAGCACTGCAATCCTTTGCGGCTTCACTGGGACCGCAGTTGCAAGC
GGGAGACGTTTTGCTGCTGGATGGTGACTTGGGTGCTGGTAAAACTAGTTTCACCAAGGGCTTGGCAAAAGGCTTAGGCA
TCACCGATTACGTCAAAAGTCCAACATTTACAATTGTTCGCGAGTATCGTCATGGCCGATTACCGCTGTATCATATGGAT
CTGTATCGCTTAGAAGACGGTGGGGCCGAGGATCTCGGTCTTGAAGAGTACTTCGAAGGTGATGGGGTGTCTGTCGTGGA
GTGGCCGGATTTTTTGGGATTAAGTGAACCAGAGACCTATCTGATGATTCATTTTCAAAAAGATGACAATGAAGATACAA
CGCGGCATCTCGAATTTGTGCCGTTTGGCCAACGCTATGAGAATTTACTCGAAAGCCTATGA

Upstream 100 bases:

>100_bases
TTTTGCAAGGTTTGAATCAGCCAGTTTCTGATTTGAGTCGTGGGGCAAATGAAGAGGATGTCTATAAGTTGGCCATTATT
ACAGCGGCCCAGACCTTGCT

Downstream 100 bases:

>100_bases
TAGCAAGCACGCAAAGAACATTTGCGTGCTTTTTTGATTTGGTTTGGTAAAGTGGTGCAGAACAAAGAAAAGGCGGTGCG
TTATGAAATTTGGCGAACAG

Product: ATPase or kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTSLKKDFTSEAALQSFAASLGPQLQAGDVLLLDGDLGAGKTSFTKGLAKGLGITDYVKSPTFTIVREYRHGRLPLYHMD
LYRLEDGGAEDLGLEEYFEGDGVSVVEWPDFLGLSEPETYLMIHFQKDDNEDTTRHLEFVPFGQRYENLLESL

Sequences:

>Translated_153_residues
MTSLKKDFTSEAALQSFAASLGPQLQAGDVLLLDGDLGAGKTSFTKGLAKGLGITDYVKSPTFTIVREYRHGRLPLYHMD
LYRLEDGGAEDLGLEEYFEGDGVSVVEWPDFLGLSEPETYLMIHFQKDDNEDTTRHLEFVPFGQRYENLLESL
>Mature_152_residues
TSLKKDFTSEAALQSFAASLGPQLQAGDVLLLDGDLGAGKTSFTKGLAKGLGITDYVKSPTFTIVREYRHGRLPLYHMDL
YRLEDGGAEDLGLEEYFEGDGVSVVEWPDFLGLSEPETYLMIHFQKDDNEDTTRHLEFVPFGQRYENLLESL

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=105, Percent_Identity=42.8571428571429, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17115; Mature: 16984

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLKKDFTSEAALQSFAASLGPQLQAGDVLLLDGDLGAGKTSFTKGLAKGLGITDYVKS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHCC
PTFTIVREYRHGRLPLYHMDLYRLEDGGAEDLGLEEYFEGDGVSVVEWPDFLGLSEPETY
CHHHHHHHHHCCCCCEEECEEEEECCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCEE
LMIHFQKDDNEDTTRHLEFVPFGQRYENLLESL
EEEEEECCCCCCCHHEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
TSLKKDFTSEAALQSFAASLGPQLQAGDVLLLDGDLGAGKTSFTKGLAKGLGITDYVKS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHCC
PTFTIVREYRHGRLPLYHMDLYRLEDGGAEDLGLEEYFEGDGVSVVEWPDFLGLSEPETY
CHHHHHHHHHCCCCCEEECEEEEECCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCEE
LMIHFQKDDNEDTTRHLEFVPFGQRYENLLESL
EEEEEECCCCCCCHHEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]