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The map label for this gene is ohrR [H]

Identifier: 116494469

GI number: 116494469

Start: 945001

End: 945456

Strand: Direct

Name: ohrR [H]

Synonym: LSEI_0962

Alternate gene names: 116494469

Gene position: 945001-945456 (Clockwise)

Preceding gene: 116494468

Following gene: 116494470

Centisome position: 32.64

GC content: 44.3

Gene sequence:

>456_bases
ATGGTTAAACCGATTACTTTGAACGAACAGCTTTGTTTTGCGATTTACAAAGCACAAAAACAATACAATCATTTCTATTC
ACAAGCGCTAGCCCCGTTCAAGTTAACCTATCCGCAGTACATCACGTTATTGTCGCTATATGAACATGGCACAATGTCGG
TTAAGCAAGTCGGACAAACACTTGAACTGGATAGTGGTACCTTGACGCCGTTAATGAAACGGCTTGAAAAAGATGGCTGG
ATCAGCCGAAAGCGTTCCACTGAAGATGAACGGCGAGTGGATGTCAGTTTAACCCAAAAGGCGCTGGATGCCCGTGATCA
GATTTTTGAACACGTTGGCTCCTGCATGGAATTAATGAACCTTCCTAAGCCTGAGTATGATCATATCAAGTCAGAAGTCA
GTCGGGTTGATGAGCATTTAAGTGCCATTCCCGACGGCGCTTTTCCCGAAGCTTAA

Upstream 100 bases:

>100_bases
GATGGTGGCTAATAATTGATAGATGAGCGCATTTTTCACAGTGTGGACGGCTTTTGCGAGCTGTTCGCGCGTTTAAAGGT
AAGTTTTAGGAGGAAGCAGC

Downstream 100 bases:

>100_bases
CATCAAAAAATAAGGTCAAAGATTTTTATCTAAATCTTTGACCTTATTTGACTTTAGTTGTATACTTAGCACTGTACTTT
TAAGAGTGCTAATAACGATT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MVKPITLNEQLCFAIYKAQKQYNHFYSQALAPFKLTYPQYITLLSLYEHGTMSVKQVGQTLELDSGTLTPLMKRLEKDGW
ISRKRSTEDERRVDVSLTQKALDARDQIFEHVGSCMELMNLPKPEYDHIKSEVSRVDEHLSAIPDGAFPEA

Sequences:

>Translated_151_residues
MVKPITLNEQLCFAIYKAQKQYNHFYSQALAPFKLTYPQYITLLSLYEHGTMSVKQVGQTLELDSGTLTPLMKRLEKDGW
ISRKRSTEDERRVDVSLTQKALDARDQIFEHVGSCMELMNLPKPEYDHIKSEVSRVDEHLSAIPDGAFPEA
>Mature_151_residues
MVKPITLNEQLCFAIYKAQKQYNHFYSQALAPFKLTYPQYITLLSLYEHGTMSVKQVGQTLELDSGTLTPLMKRLEKDGW
ISRKRSTEDERRVDVSLTQKALDARDQIFEHVGSCMELMNLPKPEYDHIKSEVSRVDEHLSAIPDGAFPEA

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17350; Mature: 17350

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPITLNEQLCFAIYKAQKQYNHFYSQALAPFKLTYPQYITLLSLYEHGTMSVKQVGQT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCHHHHHHCCH
LELDSGTLTPLMKRLEKDGWISRKRSTEDERRVDVSLTQKALDARDQIFEHVGSCMELMN
HCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPKPEYDHIKSEVSRVDEHLSAIPDGAFPEA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVKPITLNEQLCFAIYKAQKQYNHFYSQALAPFKLTYPQYITLLSLYEHGTMSVKQVGQT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCHHHHHHCCH
LELDSGTLTPLMKRLEKDGWISRKRSTEDERRVDVSLTQKALDARDQIFEHVGSCMELMN
HCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPKPEYDHIKSEVSRVDEHLSAIPDGAFPEA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]