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The map label for this gene is yjiF [H]

Identifier: 116494467

GI number: 116494467

Start: 942635

End: 943663

Strand: Direct

Name: yjiF [H]

Synonym: LSEI_0960

Alternate gene names: 116494467

Gene position: 942635-943663 (Clockwise)

Preceding gene: 116494466

Following gene: 116494468

Centisome position: 32.56

GC content: 46.36

Gene sequence:

>1029_bases
ATGAGTCGTGAAACTAAATTTATTCGGGTCATCCGCGGTCGGCGTCCAAAGGTGGTTGTCATTGGCGGTGGAACAGGCTT
GCCGGTCATTCTGCATAGTTTGCATGAGCAAGATGCAGATGTGACTGCAATTGTGACTGTTGCCGATGACGGCGGTTCAT
CAGGGACAATCCGCAACTATATCAACGTAGTGCCGCCTGGTGATATTCGCAATGTGCTAGTGGCTTTATCGGAGTTGCCG
AGTTTGTATTTGGATATTTTTCAATATCGGTTCAATACAACTGATGCTTTTTTCGCTGGGCATGCGATTGGCAATCTGAT
TATTGCCGCGCTGTCAGAAATGAAAGGCGGCATTTTCCCAGCGGTTCAGCAACTAAGCGAAATGATGCAAGTTGATGGTC
ACGTTTATCCGGCCAGCAACACGCCGTTAACCTTAAATGCTGAATTCACCGATGGTACAAAGCTGTCTGGTGAAGCTGAG
ATTACAGCGGCTGGGAAAAACATCAAGCATATTTCGGTTTCAGAAACAGATCCTGCCAATGGCAAACCAGAGGCGGTCAA
AGAAGTTATCGATGCGATTATGGACGCTGATGTTGTTGTTTTAGGCCCAGGCAGTCTTTTCACTAGCATTTTGCCTAACT
TGATGATTGAAAATCTGGGGGATGCGGTGAAGAAGACGCAAGCCGAAGTGATTTACATTGTCAATATCATGACCCAAAAA
GGCGAAACCCAGCATTTTACCGATGCCGATCATGTCCGGGTTCTGAATGAACAAATGGGCGAGAACTTTGTGGATACGGT
TTTGGTTAACATTGAACCAGTCCCCGATAATTATCTGGATCATCAAAAGTACAACGAAATTCTCACGCCGGTTAAGCATA
ACTATCAAGGCTTGCGAGACATGGGCTGCCGCGTGATTTCCGAAGACTTTTTAAAGTTGCGCGATCATGGGGTCTTTCAT
GATGGTGATAAAGTCGCCAAGGAGATTTTAAACTTGGCCTTTCAGGTCAGCGGCAAAACCCGGAGGTGA

Upstream 100 bases:

>100_bases
TGGCTTTTGCCGAGCGGATTGGTAAGGCGTTTTCAGATGCATATGCCGTTGATATCACGCATCGAGACATTAAGAAGCAT
AAGGAGACGGTGAATCGCTC

Downstream 100 bases:

>100_bases
GGGTATGGCAAGTTTCGCCAGTCTGGTGAAAAAAGAACTGACACAGCTCGAGGTACATCCAGAACATGCTAAGGCTGAAT
TGTCTGCTTTGATTCGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSRETKFIRVIRGRRPKVVVIGGGTGLPVILHSLHEQDADVTAIVTVADDGGSSGTIRNYINVVPPGDIRNVLVALSELP
SLYLDIFQYRFNTTDAFFAGHAIGNLIIAALSEMKGGIFPAVQQLSEMMQVDGHVYPASNTPLTLNAEFTDGTKLSGEAE
ITAAGKNIKHISVSETDPANGKPEAVKEVIDAIMDADVVVLGPGSLFTSILPNLMIENLGDAVKKTQAEVIYIVNIMTQK
GETQHFTDADHVRVLNEQMGENFVDTVLVNIEPVPDNYLDHQKYNEILTPVKHNYQGLRDMGCRVISEDFLKLRDHGVFH
DGDKVAKEILNLAFQVSGKTRR

Sequences:

>Translated_342_residues
MSRETKFIRVIRGRRPKVVVIGGGTGLPVILHSLHEQDADVTAIVTVADDGGSSGTIRNYINVVPPGDIRNVLVALSELP
SLYLDIFQYRFNTTDAFFAGHAIGNLIIAALSEMKGGIFPAVQQLSEMMQVDGHVYPASNTPLTLNAEFTDGTKLSGEAE
ITAAGKNIKHISVSETDPANGKPEAVKEVIDAIMDADVVVLGPGSLFTSILPNLMIENLGDAVKKTQAEVIYIVNIMTQK
GETQHFTDADHVRVLNEQMGENFVDTVLVNIEPVPDNYLDHQKYNEILTPVKHNYQGLRDMGCRVISEDFLKLRDHGVFH
DGDKVAKEILNLAFQVSGKTRR
>Mature_341_residues
SRETKFIRVIRGRRPKVVVIGGGTGLPVILHSLHEQDADVTAIVTVADDGGSSGTIRNYINVVPPGDIRNVLVALSELPS
LYLDIFQYRFNTTDAFFAGHAIGNLIIAALSEMKGGIFPAVQQLSEMMQVDGHVYPASNTPLTLNAEFTDGTKLSGEAEI
TAAGKNIKHISVSETDPANGKPEAVKEVIDAIMDADVVVLGPGSLFTSILPNLMIENLGDAVKKTQAEVIYIVNIMTQKG
ETQHFTDADHVRVLNEQMGENFVDTVLVNIEPVPDNYLDHQKYNEILTPVKHNYQGLRDMGCRVISEDFLKLRDHGVFHD
GDKVAKEILNLAFQVSGKTRR

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=289, Percent_Identity=29.0657439446367, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 37415; Mature: 37284

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRETKFIRVIRGRRPKVVVIGGGTGLPVILHSLHEQDADVTAIVTVADDGGSSGTIRNY
CCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHE
INVVPPGDIRNVLVALSELPSLYLDIFQYRFNTTDAFFAGHAIGNLIIAALSEMKGGIFP
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
AVQQLSEMMQVDGHVYPASNTPLTLNAEFTDGTKLSGEAEITAAGKNIKHISVSETDPAN
HHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCC
GKPEAVKEVIDAIMDADVVVLGPGSLFTSILPNLMIENLGDAVKKTQAEVIYIVNIMTQK
CCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC
GETQHFTDADHVRVLNEQMGENFVDTVLVNIEPVPDNYLDHQKYNEILTPVKHNYQGLRD
CCCCCCCCHHHHHHHHHHHCCHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
MGCRVISEDFLKLRDHGVFHDGDKVAKEILNLAFQVSGKTRR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
SRETKFIRVIRGRRPKVVVIGGGTGLPVILHSLHEQDADVTAIVTVADDGGSSGTIRNY
CCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHE
INVVPPGDIRNVLVALSELPSLYLDIFQYRFNTTDAFFAGHAIGNLIIAALSEMKGGIFP
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
AVQQLSEMMQVDGHVYPASNTPLTLNAEFTDGTKLSGEAEITAAGKNIKHISVSETDPAN
HHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCC
GKPEAVKEVIDAIMDADVVVLGPGSLFTSILPNLMIENLGDAVKKTQAEVIYIVNIMTQK
CCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC
GETQHFTDADHVRVLNEQMGENFVDTVLVNIEPVPDNYLDHQKYNEILTPVKHNYQGLRD
CCCCCCCCHHHHHHHHHHHCCHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
MGCRVISEDFLKLRDHGVFHDGDKVAKEILNLAFQVSGKTRR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]